Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01151

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
1,262,333	-		MIT1002_01149	0.76	-1.4
1,262,370	-		MIT1002_01149	0.82	-1.1
1,262,410	-		MIT1002_01149	0.88	+0.6
1,262,418	-		MIT1002_01149	0.89	+1.5
1,262,444	-				+0.7
1,262,455	+				-0.7
1,262,463	-				+0.9
1,262,490	+				-0.8
1,262,508	+				-1.1
1,262,509	-				-0.6
1,262,583	-		MIT1002_01150	0.10	-2.8
1,262,653	+		MIT1002_01150	0.25	-0.7
1,262,653	+		MIT1002_01150	0.25	-1.2
1,262,653	+		MIT1002_01150	0.25	+0.5
1,262,653	+		MIT1002_01150	0.25	-1.3
1,262,661	-		MIT1002_01150	0.27	-0.9
1,262,661	-		MIT1002_01150	0.27	-1.9
1,262,661	-		MIT1002_01150	0.27	-1.6
1,262,706	+		MIT1002_01150	0.37	-1.9
1,262,714	-		MIT1002_01150	0.38	+1.1
1,262,795	+		MIT1002_01150	0.56	-3.9
1,262,809	-		MIT1002_01150	0.59	-2.4
1,262,894	+		MIT1002_01150	0.77	-0.8
1,262,901	+		MIT1002_01150	0.78	-1.9
1,262,923	+		MIT1002_01150	0.83	-0.3
1,263,139	-				-2.7
1,263,146	-				+0.5
1,263,187	+				-0.7
1,263,195	-				-1.1
1,263,203	-				-0.1
1,263,286	-				-1.2
1,263,407	+				-0.5
1,263,415	-				-1.2
1,263,427	+		MIT1002_01151	0.11	+0.1
1,263,468	+		MIT1002_01151	0.15	-1.8
1,263,477	-		MIT1002_01151	0.16	+0.7
1,263,492	+		MIT1002_01151	0.17	-1.1
1,263,500	-		MIT1002_01151	0.18	-2.2
1,263,636	+		MIT1002_01151	0.31	+0.2
1,263,644	-		MIT1002_01151	0.32	-3.8
1,263,646	+		MIT1002_01151	0.32	-1.8
1,263,699	+		MIT1002_01151	0.37	-0.0
1,263,788	-		MIT1002_01151	0.45	+0.2
1,263,816	-		MIT1002_01151	0.48	-0.9
1,263,816	-		MIT1002_01151	0.48	+0.4
1,263,816	-		MIT1002_01151	0.48	-4.2
1,263,838	-		MIT1002_01151	0.50	-0.4
1,263,838	-		MIT1002_01151	0.50	+1.3
1,263,838	-		MIT1002_01151	0.50	-1.9
1,263,853	+		MIT1002_01151	0.51	+1.2
1,263,860	+		MIT1002_01151	0.52	-3.2
1,263,868	-		MIT1002_01151	0.53	-2.1
1,263,891	+		MIT1002_01151	0.55	-1.7
1,263,908	+		MIT1002_01151	0.56	-1.0
1,263,915	+		MIT1002_01151	0.57	-2.9
1,263,915	+		MIT1002_01151	0.57	+1.9
1,263,915	+		MIT1002_01151	0.57	-0.2
1,263,916	-		MIT1002_01151	0.57	+0.8
1,263,923	-		MIT1002_01151	0.58	-0.4
1,263,980	+		MIT1002_01151	0.63	-0.9
1,264,004	+		MIT1002_01151	0.66	-1.5
1,264,031	-		MIT1002_01151	0.68	+1.6
1,264,046	-		MIT1002_01151	0.69	-0.2
1,264,146	+		MIT1002_01151	0.79	+2.1
1,264,282	+				+0.1
1,264,347	-				-1.5
1,264,728	+		MIT1002_01153	0.57	-0.5
1,264,738	+		MIT1002_01153	0.61	-0.9
1,264,755	+		MIT1002_01153	0.67	+1.1
1,264,755	+		MIT1002_01153	0.67	+0.1
1,264,778	+		MIT1002_01153	0.75	+0.4
1,265,130	-				-0.8
1,265,138	+				+1.6
1,265,154	+				+1.0
1,265,311	+		MIT1002_01154	0.21	+0.9
1,265,311	+		MIT1002_01154	0.21	-2.1
1,265,311	+		MIT1002_01154	0.21	+0.1
1,265,319	+		MIT1002_01154	0.21	+1.7