Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01142

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
1,253,760	-		MIT1002_01141	0.47	-1.5
1,253,760	-		MIT1002_01141	0.47	-1.6
1,253,778	+		MIT1002_01141	0.48	-1.0
1,253,786	-		MIT1002_01141	0.49	+1.4
1,253,786	-		MIT1002_01141	0.49	+1.6
1,253,786	-		MIT1002_01141	0.49	-0.1
1,253,820	+		MIT1002_01141	0.51	-0.8
1,253,826	-		MIT1002_01141	0.51	-2.3
1,253,826	-		MIT1002_01141	0.51	+0.8
1,253,868	-		MIT1002_01141	0.53	+0.3
1,253,924	-		MIT1002_01141	0.57	-1.9
1,254,050	-		MIT1002_01141	0.64	-2.1
1,254,050	-		MIT1002_01141	0.64	-0.8
1,254,050	-		MIT1002_01141	0.64	+2.2
1,254,309	-		MIT1002_01141	0.78	+1.3
1,254,422	+		MIT1002_01141	0.85	-2.5
1,254,615	+				-2.2
1,254,623	-				-1.9
1,254,754	-				-1.9
1,254,754	-				-2.8
1,254,793	-				-0.1
1,254,874	-		MIT1002_01142	0.16	+0.5
1,254,918	+		MIT1002_01142	0.20	+0.6
1,254,959	+		MIT1002_01142	0.24	+0.0
1,254,985	-		MIT1002_01142	0.26	+0.0
1,254,990	-		MIT1002_01142	0.27	+0.3
1,255,087	-		MIT1002_01142	0.35	+1.2
1,255,093	+		MIT1002_01142	0.36	+0.4
1,255,122	-		MIT1002_01142	0.38	+0.7
1,255,129	+		MIT1002_01142	0.39	-0.4
1,255,150	+		MIT1002_01142	0.41	-1.9
1,255,160	-		MIT1002_01142	0.42	+0.6
1,255,176	+		MIT1002_01142	0.43	+0.2
1,255,221	-		MIT1002_01142	0.47	-0.3
1,255,231	+		MIT1002_01142	0.48	+0.4
1,255,324	+		MIT1002_01142	0.56	+0.9
1,255,370	+		MIT1002_01142	0.61	+1.1
1,255,464	+		MIT1002_01142	0.69	+0.5
1,255,464	+		MIT1002_01142	0.69	+0.5
1,255,515	+		MIT1002_01142	0.73	+1.2
1,255,544	-		MIT1002_01142	0.76	-0.9
1,255,593	-		MIT1002_01142	0.80	-0.0
1,255,600	+		MIT1002_01142	0.81	-1.3
1,255,608	-		MIT1002_01142	0.82	+1.1
1,255,628	-		MIT1002_01142	0.84	+0.7
1,255,649	+		MIT1002_01142	0.85	+1.0
1,255,693	-		MIT1002_01142	0.89	+2.2
1,255,715	+				+1.2
1,255,715	+				+0.6
1,255,715	+				+1.2
1,255,715	+				-0.9
1,255,715	+				+0.6
1,255,715	+				+0.2
1,255,723	-				+1.4
1,255,723	-				+0.3
1,255,859	-				-0.4
1,255,928	+				-4.3
1,255,936	-				-3.3
1,255,936	-				+0.2
1,255,958	+				-3.1
1,255,995	-				-1.9
1,256,014	-				-1.8
1,256,156	-		MIT1002_01143	0.18	-2.0
1,256,232	+		MIT1002_01143	0.29	-2.1
1,256,343	-		MIT1002_01143	0.45	-3.6
1,256,343	-		MIT1002_01143	0.45	-4.2
1,256,414	-		MIT1002_01143	0.55	-3.9
1,256,474	+		MIT1002_01143	0.64	-0.8
1,256,502	+		MIT1002_01143	0.68	-0.8
1,256,510	-		MIT1002_01143	0.69	-1.8
1,256,577	+		MIT1002_01143	0.79	-2.3
1,256,655	-				-0.8
1,256,727	+				-0.2
1,256,744	-				+1.1
1,256,744	-				+1.4