Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01115

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
1,223,073	-		MIT1002_01114	0.64	-0.4
1,223,110	-		MIT1002_01114	0.65	-1.0
1,223,140	-		MIT1002_01114	0.66	-0.0
1,223,228	+		MIT1002_01114	0.70	-3.7
1,223,545	+		MIT1002_01114	0.82	-1.3
1,223,545	+		MIT1002_01114	0.82	-0.6
1,223,553	-		MIT1002_01114	0.82	-0.3
1,223,595	-		MIT1002_01114	0.84	+0.8
1,223,617	-		MIT1002_01114	0.84	+0.1
1,223,675	+		MIT1002_01114	0.87	-0.4
1,223,692	-		MIT1002_01114	0.87	-3.3
1,223,759	+		MIT1002_01114	0.90	+1.3
1,223,825	+				-1.0
1,223,832	+				-1.0
1,223,840	-				-1.0
1,223,840	-				-1.7
1,223,857	-				-1.2
1,223,863	+				-0.0
1,223,908	-				-0.3
1,223,908	-				-2.6
1,223,951	+				-0.2
1,223,957	+				-0.0
1,223,957	+				-0.6
1,223,959	-				-0.8
1,223,970	+				-1.3
1,224,026	-				+0.3
1,224,028	+				-2.6
1,224,042	+				+1.1
1,224,069	-				-0.9
1,224,071	-				+0.6
1,224,081	-				+1.0
1,224,148	-		MIT1002_01115	0.17	-2.3
1,224,162	-		MIT1002_01115	0.19	-2.2
1,224,164	+		MIT1002_01115	0.20	-1.6
1,224,164	+		MIT1002_01115	0.20	+0.0
1,224,164	+		MIT1002_01115	0.20	-0.6
1,224,164	+		MIT1002_01115	0.20	-0.6
1,224,164	+		MIT1002_01115	0.20	-1.0
1,224,164	+		MIT1002_01115	0.20	-0.7
1,224,172	-		MIT1002_01115	0.21	+1.2
1,224,172	-		MIT1002_01115	0.21	+0.6
1,224,243	+		MIT1002_01115	0.33	+0.5
1,224,251	-		MIT1002_01115	0.35	-1.5
1,224,251	-		MIT1002_01115	0.35	-1.6
1,224,264	-		MIT1002_01115	0.37	+1.0
1,224,279	+		MIT1002_01115	0.39	+0.9
1,224,410	+		MIT1002_01115	0.61	-2.6
1,224,410	+		MIT1002_01115	0.61	+0.5
1,224,418	-		MIT1002_01115	0.63	-0.3
1,224,418	-		MIT1002_01115	0.63	+0.2
1,224,453	-		MIT1002_01115	0.69	+0.1
1,224,494	+		MIT1002_01115	0.76	+0.7
1,224,494	+		MIT1002_01115	0.76	-0.7
1,224,565	-		MIT1002_01115	0.88	+0.4
1,224,569	+		MIT1002_01115	0.88	-1.9
1,224,578	-		MIT1002_01115	0.90	-0.5
1,224,701	+				+0.4
1,224,709	-				-1.9
1,224,709	-				+1.2
1,224,709	-				+0.5
1,224,714	+				+0.4
1,224,873	+		MIT1002_01116	0.55	-1.4
1,224,881	-		MIT1002_01116	0.58	-2.8
1,224,925	+		MIT1002_01116	0.73	-1.8
1,224,925	+		MIT1002_01116	0.73	-0.8
1,224,933	-		MIT1002_01116	0.76	-1.1
1,224,933	-		MIT1002_01116	0.76	-1.1
1,224,976	+				-2.4
1,225,029	+				+0.6
1,225,145	+				+1.6
1,225,153	-				-0.8
1,225,153	-				+1.0
1,225,180	-				+0.1
1,225,378	+				+1.9
1,225,420	-				-0.2