Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01043

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
1,152,115	+		MIT1002_01042	0.39	+0.1
1,152,183	+		MIT1002_01042	0.44	-0.9
1,152,191	+		MIT1002_01042	0.45	+0.4
1,152,302	+		MIT1002_01042	0.53	-0.2
1,152,310	-		MIT1002_01042	0.53	+1.3
1,152,339	+		MIT1002_01042	0.55	+0.0
1,152,386	-		MIT1002_01042	0.59	-1.5
1,152,483	-		MIT1002_01042	0.66	-1.6
1,152,726	+		MIT1002_01042	0.83	-1.7
1,152,731	+		MIT1002_01042	0.84	-0.9
1,152,739	-		MIT1002_01042	0.84	+1.4
1,152,739	-		MIT1002_01042	0.84	-0.1
1,152,739	-		MIT1002_01042	0.84	-0.5
1,152,739	-		MIT1002_01042	0.84	-0.5
1,152,744	-		MIT1002_01042	0.85	+1.3
1,152,845	+				-0.7
1,152,853	-				+0.7
1,152,858	-				+1.1
1,152,915	-				-1.6
1,152,925	+				+0.3
1,152,947	-				-1.2
1,153,047	-				-0.0
1,153,135	-				+0.1
1,153,217	+		MIT1002_01043	0.19	+0.6
1,153,308	-		MIT1002_01043	0.30	+0.2
1,153,313	-		MIT1002_01043	0.30	-1.2
1,153,356	-		MIT1002_01043	0.35	-0.7
1,153,393	+		MIT1002_01043	0.39	+0.3
1,153,791	-		MIT1002_01043	0.85	-2.0
1,153,939	+				-0.4
1,153,957	+				+0.3
1,153,965	+				-0.3
1,153,988	-		MIT1002_01044	0.17	-0.4
1,154,005	-		MIT1002_01044	0.34	-1.0
1,154,028	+		MIT1002_01044	0.58	+0.5
1,154,044	-		MIT1002_01044	0.74	-0.2