Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00930

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
1,031,013	-				+1.3
1,031,050	-				-1.5
1,031,072	+				+1.2
1,031,079	+		MIT1002_00929	0.11	+0.2
1,031,126	+		MIT1002_00929	0.18	+1.3
1,031,176	-		MIT1002_00929	0.25	-0.7
1,031,190	+		MIT1002_00929	0.28	-0.4
1,031,198	-		MIT1002_00929	0.29	+0.2
1,031,203	-		MIT1002_00929	0.30	+1.1
1,031,237	+		MIT1002_00929	0.35	+1.7
1,031,256	+		MIT1002_00929	0.38	+0.8
1,031,305	-		MIT1002_00929	0.45	-0.3
1,031,377	+		MIT1002_00929	0.56	-2.2
1,031,377	+		MIT1002_00929	0.56	-0.5
1,031,385	-		MIT1002_00929	0.57	-1.8
1,031,385	-		MIT1002_00929	0.57	+0.6
1,031,437	+		MIT1002_00929	0.65	+0.6
1,031,437	+		MIT1002_00929	0.65	-0.2
1,031,439	+		MIT1002_00929	0.65	-2.4
1,031,445	-		MIT1002_00929	0.66	+0.3
1,031,456	+		MIT1002_00929	0.68	-0.5
1,031,464	-		MIT1002_00929	0.69	+0.4
1,031,545	+		MIT1002_00929	0.81	+0.6
1,031,575	-		MIT1002_00929	0.86	+0.5
1,031,611	+				-0.4
1,031,621	+				-0.2
1,031,658	+				+0.2
1,031,659	+				-0.3
1,031,666	-				+0.4
1,031,798	-				+0.2
1,031,831	-				+1.5
1,031,866	-				-1.2
1,031,866	-				-0.4
1,031,873	+				-0.4
1,031,873	+				+0.3
1,031,996	+				+0.4
1,032,004	-				+1.1
1,032,004	-				+0.5
1,032,107	-		MIT1002_00930	0.39	-0.5
1,032,107	-		MIT1002_00930	0.39	+0.5
1,032,107	-		MIT1002_00930	0.39	-2.2
1,032,189	+		MIT1002_00930	0.64	+0.8
1,032,192	-		MIT1002_00930	0.65	-1.4
1,032,215	+		MIT1002_00930	0.72	-0.1
1,032,275	-				+0.7
1,032,380	+				-0.3
1,032,380	+				-0.4
1,032,380	+				+3.3
1,032,380	+				-0.1
1,032,388	-				+0.4
1,032,388	-				-0.1
1,032,388	-				+0.2
1,032,388	-				-0.9
1,032,403	+				+0.0
1,032,412	+				+0.2
1,032,412	+				+0.5
1,032,420	-				+0.4
1,032,542	+		MIT1002_00931	0.11	+2.0
1,032,542	+		MIT1002_00931	0.11	-0.5
1,032,542	+		MIT1002_00931	0.11	+0.3
1,032,550	-		MIT1002_00931	0.12	-1.0
1,032,550	-		MIT1002_00931	0.12	-0.5
1,032,550	-		MIT1002_00931	0.12	-0.3
1,032,550	-		MIT1002_00931	0.12	+2.4
1,032,559	+		MIT1002_00931	0.13	-0.5
1,032,571	+		MIT1002_00931	0.15	+1.3
1,032,587	+		MIT1002_00931	0.17	-1.4
1,032,607	-		MIT1002_00931	0.19	-1.7
1,032,607	-		MIT1002_00931	0.19	-3.5
1,032,613	+		MIT1002_00931	0.20	+0.1
1,032,632	-		MIT1002_00931	0.23	-1.3
1,032,687	+		MIT1002_00931	0.30	+0.8
1,032,695	-		MIT1002_00931	0.31	+1.2
1,032,757	+		MIT1002_00931	0.39	+0.5
1,032,757	+		MIT1002_00931	0.39	+0.5
1,032,757	+		MIT1002_00931	0.39	+1.3
1,032,757	+		MIT1002_00931	0.39	-1.3
1,032,757	+		MIT1002_00931	0.39	-1.7
1,032,765	-		MIT1002_00931	0.40	-1.6
1,032,837	+		MIT1002_00931	0.50	-1.7
1,032,848	+		MIT1002_00931	0.51	-1.3
1,032,848	+		MIT1002_00931	0.51	-0.2
1,032,909	-		MIT1002_00931	0.59	+1.2
1,032,959	+		MIT1002_00931	0.66	+0.3
1,032,968	+		MIT1002_00931	0.67	-1.1
1,032,976	-		MIT1002_00931	0.68	+0.2
1,032,976	-		MIT1002_00931	0.68	+0.9
1,032,984	+		MIT1002_00931	0.69	-1.2
1,032,986	+		MIT1002_00931	0.69	-3.4
1,033,013	+		MIT1002_00931	0.73	+0.3
1,033,026	-		MIT1002_00931	0.74	-2.5
1,033,026	-		MIT1002_00931	0.74	-0.6
1,033,046	+		MIT1002_00931	0.77	+0.6
1,033,054	+		MIT1002_00931	0.78	+0.6
1,033,060	-		MIT1002_00931	0.79	-1.1
1,033,087	+		MIT1002_00931	0.82	-0.5
1,033,087	-		MIT1002_00931	0.82	+0.5
1,033,100	-		MIT1002_00931	0.84	+0.4
1,033,276	+				-1.0
1,033,284	-				-4.5
1,033,291	+				+0.3
1,033,299	-				-5.6