Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00919

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
1,017,694	-		MIT1002_00918	0.85	-0.3
1,017,694	-		MIT1002_00918	0.85	+0.5
1,017,735	+		MIT1002_00918	0.87	+1.3
1,017,743	-		MIT1002_00918	0.87	-0.4
1,017,756	-		MIT1002_00918	0.88	+0.2
1,017,760	-		MIT1002_00918	0.88	+0.6
1,017,772	+		MIT1002_00918	0.89	-2.5
1,017,780	-		MIT1002_00918	0.89	-1.1
1,017,780	-		MIT1002_00918	0.89	-2.2
1,017,782	+		MIT1002_00918	0.89	+0.1
1,017,782	+		MIT1002_00918	0.89	-1.5
1,017,790	-		MIT1002_00918	0.89	+0.4
1,017,840	-				+2.4
1,017,867	+				+0.3
1,017,984	+				-1.7
1,017,994	-				+1.6
1,018,023	-				-1.3
1,018,056	-				-1.0
1,018,062	-				-1.8
1,018,087	+				-0.2
1,018,176	+				+0.2
1,018,194	+				-1.5
1,018,197	-				+2.9
1,018,263	+				-0.1
1,018,339	-				-2.0
1,018,397	+				+0.6
1,018,406	-				+0.1
1,018,446	+				+1.1
1,018,448	-				-2.3
1,018,567	+				-0.6
1,018,610	-				+1.2
1,018,629	-				+1.1
1,018,629	-				-2.0
1,018,632	+				-0.1
1,018,664	-				+1.1
1,018,684	-				+1.6
1,018,768	-				+1.2
1,018,859	-		MIT1002_00919	0.16	+1.7
1,018,884	+		MIT1002_00919	0.18	+1.0
1,018,912	+		MIT1002_00919	0.21	-0.7
1,018,948	+		MIT1002_00919	0.24	-0.0
1,018,948	+		MIT1002_00919	0.24	-0.5
1,018,948	+		MIT1002_00919	0.24	-0.4
1,018,955	+		MIT1002_00919	0.25	+1.0
1,018,956	-		MIT1002_00919	0.25	+1.0
1,018,956	-		MIT1002_00919	0.25	-1.0
1,018,956	-		MIT1002_00919	0.25	+0.8
1,018,963	-		MIT1002_00919	0.26	-0.2
1,019,061	-		MIT1002_00919	0.35	-1.8
1,019,061	-		MIT1002_00919	0.35	+0.5
1,019,080	+		MIT1002_00919	0.37	+0.8
1,019,094	+		MIT1002_00919	0.38	-2.9
1,019,149	-		MIT1002_00919	0.43	-0.8
1,019,197	-		MIT1002_00919	0.48	+1.1
1,019,197	-		MIT1002_00919	0.48	+0.6
1,019,198	+		MIT1002_00919	0.48	+1.9
1,019,256	+		MIT1002_00919	0.53	+0.9
1,019,261	+		MIT1002_00919	0.54	+1.6
1,019,345	+		MIT1002_00919	0.62	-2.8
1,019,345	+		MIT1002_00919	0.62	+0.7
1,019,353	-		MIT1002_00919	0.63	-0.5
1,019,353	-		MIT1002_00919	0.63	+2.6
1,019,353	-		MIT1002_00919	0.63	+1.1
1,019,353	-		MIT1002_00919	0.63	+0.9
1,019,360	+		MIT1002_00919	0.63	+1.4
1,019,387	+		MIT1002_00919	0.66	-0.4
1,019,399	-		MIT1002_00919	0.67	-0.3
1,019,437	+		MIT1002_00919	0.71	+1.2
1,019,445	-		MIT1002_00919	0.71	-2.3
1,019,448	+		MIT1002_00919	0.72	+0.2
1,019,570	-		MIT1002_00919	0.83	-0.3
1,019,610	+		MIT1002_00919	0.87	+0.2
1,019,669	+				+0.5
1,019,688	+				+1.9
1,019,692	-				-0.2
1,019,727	+				+1.2
1,019,803	-				+0.7
1,019,818	-				+1.0
1,019,873	+				-0.6
1,019,876	-				+1.1
1,019,881	-				-0.2
1,020,006	-				+1.5
1,020,093	-		MIT1002_00920	0.13	+0.2
1,020,104	+		MIT1002_00920	0.13	+0.4
1,020,190	+		MIT1002_00920	0.16	-1.1
1,020,190	+		MIT1002_00920	0.16	-0.4
1,020,240	+		MIT1002_00920	0.18	+2.0
1,020,240	+		MIT1002_00920	0.18	-0.7
1,020,245	+		MIT1002_00920	0.18	+1.0
1,020,245	+		MIT1002_00920	0.18	+0.7
1,020,250	+		MIT1002_00920	0.18	+1.3
1,020,259	-		MIT1002_00920	0.19	-1.0
1,020,340	+		MIT1002_00920	0.22	+3.1
1,020,363	-		MIT1002_00920	0.23	+1.5
1,020,491	+		MIT1002_00920	0.27	+0.3
1,020,506	+		MIT1002_00920	0.28	-1.8
1,020,506	+		MIT1002_00920	0.28	-1.0
1,020,535	+		MIT1002_00920	0.29	-0.1
1,020,535	-		MIT1002_00920	0.29	-1.3
1,020,669	+		MIT1002_00920	0.34	+0.2
1,020,710	+		MIT1002_00920	0.35	+0.9
1,020,740	-		MIT1002_00920	0.36	-0.6