Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00917

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
1,014,394	+		MIT1002_00915	0.84	+0.8
1,014,410	-		MIT1002_00915	0.85	+1.3
1,014,410	-		MIT1002_00915	0.85	+1.3
1,014,410	-		MIT1002_00915	0.85	+0.3
1,014,427	+		MIT1002_00915	0.87	-1.1
1,014,510	+				-1.4
1,014,518	-				-1.4
1,014,528	+				-2.2
1,014,570	+				-0.6
1,014,590	-				-0.6
1,014,621	-				+1.9
1,014,645	-				-0.3
1,014,646	+				-0.7
1,014,646	-				-1.5
1,014,656	+				+0.0
1,014,663	+				+0.3
1,014,663	+				+0.6
1,014,671	+				-0.5
1,014,744	+		MIT1002_00916	0.15	+0.6
1,014,762	+		MIT1002_00916	0.18	-3.2
1,014,866	-		MIT1002_00916	0.36	-0.7
1,014,987	-		MIT1002_00916	0.57	+0.5
1,014,993	+		MIT1002_00916	0.58	-1.2
1,015,032	-		MIT1002_00916	0.65	+0.0
1,015,034	+		MIT1002_00916	0.65	+0.1
1,015,166	-		MIT1002_00916	0.88	+0.3
1,015,220	-				+1.2
1,015,225	-				-1.0
1,015,349	+		MIT1002_00917	0.18	+2.9
1,015,392	-		MIT1002_00917	0.32	+0.1
1,015,440	-		MIT1002_00917	0.47	-0.7
1,015,538	+		MIT1002_00917	0.78	+1.2
1,015,573	+		MIT1002_00917	0.90	+0.2
1,015,573	+		MIT1002_00917	0.90	-0.2
1,015,585	+				+2.9
1,015,585	+				+0.9
1,015,593	-				+0.0
1,015,697	+				-0.1
1,015,717	+				+1.5
1,015,717	+				-0.1
1,015,826	+				+0.4
1,015,901	+				-3.0
1,015,901	+				-2.0
1,015,950	-		MIT1002_00918	0.12	-2.4
1,015,962	-		MIT1002_00918	0.12	-0.6
1,015,966	+		MIT1002_00918	0.12	+1.6
1,015,966	+		MIT1002_00918	0.12	+0.0
1,016,024	+		MIT1002_00918	0.15	+0.3
1,016,042	+		MIT1002_00918	0.16	+0.3
1,016,042	+		MIT1002_00918	0.16	+1.9
1,016,050	-		MIT1002_00918	0.16	+0.0
1,016,057	-		MIT1002_00918	0.16	-0.2
1,016,067	+		MIT1002_00918	0.17	+0.4
1,016,174	-		MIT1002_00918	0.21	-0.4
1,016,284	+		MIT1002_00918	0.26	+0.5
1,016,284	+		MIT1002_00918	0.26	-0.5
1,016,284	+		MIT1002_00918	0.26	+1.5
1,016,284	+		MIT1002_00918	0.26	+1.2
1,016,292	-		MIT1002_00918	0.26	-0.4
1,016,292	-		MIT1002_00918	0.26	+2.0
1,016,292	-		MIT1002_00918	0.26	+0.8
1,016,366	+		MIT1002_00918	0.29	-0.2
1,016,366	+		MIT1002_00918	0.29	-0.7
1,016,374	-		MIT1002_00918	0.30	+1.7
1,016,374	-		MIT1002_00918	0.30	+0.2
1,016,374	-		MIT1002_00918	0.30	-0.2
1,016,408	-		MIT1002_00918	0.31	-0.1
1,016,413	-		MIT1002_00918	0.31	-2.3
1,016,417	+		MIT1002_00918	0.31	+0.0
1,016,419	-		MIT1002_00918	0.31	+1.6
1,016,448	-		MIT1002_00918	0.33	-0.3
1,016,458	+		MIT1002_00918	0.33	+0.6
1,016,500	-		MIT1002_00918	0.35	+0.6
1,016,515	+		MIT1002_00918	0.35	-0.1
1,016,515	+		MIT1002_00918	0.35	-0.2
1,016,523	-		MIT1002_00918	0.36	+0.3
1,016,525	+		MIT1002_00918	0.36	+0.7
1,016,525	+		MIT1002_00918	0.36	-1.5
1,016,550	-		MIT1002_00918	0.37	-0.9