Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00103

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
111,187	-				-2.9
111,281	-				-0.4
111,292	+				+1.3
111,334	+				+0.5
111,374	+		MIT1002_00103	0.10	+1.3
111,417	-		MIT1002_00103	0.14	+0.2
111,426	+		MIT1002_00103	0.15	+1.5
111,526	-		MIT1002_00103	0.24	-0.2
111,544	-		MIT1002_00103	0.26	-0.0
111,558	-		MIT1002_00103	0.27	+0.1
111,568	+		MIT1002_00103	0.28	+1.0
111,617	+		MIT1002_00103	0.33	+3.2
111,656	-		MIT1002_00103	0.37	-0.1
111,666	-		MIT1002_00103	0.38	-1.9
111,712	+		MIT1002_00103	0.42	-0.7
111,757	-		MIT1002_00103	0.46	+0.6
111,802	-		MIT1002_00103	0.50	-1.4
111,844	+		MIT1002_00103	0.54	+1.0
111,852	-		MIT1002_00103	0.55	-0.7
111,960	+		MIT1002_00103	0.65	+0.2
112,025	-		MIT1002_00103	0.71	-0.1
112,086	-		MIT1002_00103	0.77	+0.7
112,118	+		MIT1002_00103	0.80	+1.0
112,167	+		MIT1002_00103	0.85	-0.1
112,186	+		MIT1002_00103	0.87	-0.3
112,223	-				+0.7
112,278	-				-0.3
112,283	-				+0.0
112,290	-				+0.4
112,317	-				-2.4
112,386	+				+0.7
112,392	-				-1.9
112,463	+				-1.4
112,463	-				+0.0
112,525	+				+0.9
112,526	-				-0.3
112,548	+				-1.4
112,577	+				-0.3
112,582	+				-3.0
112,592	+		MIT1002_00104	0.10	-1.2
112,592	+		MIT1002_00104	0.10	-0.4
112,592	+		MIT1002_00104	0.10	+0.0
112,592	+		MIT1002_00104	0.10	+1.6
112,592	+		MIT1002_00104	0.10	+0.7
112,592	+		MIT1002_00104	0.10	+0.5
112,592	+		MIT1002_00104	0.10	-1.0
112,592	+		MIT1002_00104	0.10	-0.6
112,600	-		MIT1002_00104	0.12	-1.2
112,600	-		MIT1002_00104	0.12	-0.4
112,600	-		MIT1002_00104	0.12	-0.1
112,669	+		MIT1002_00104	0.22	-0.2
112,677	-		MIT1002_00104	0.23	-2.2
112,748	-		MIT1002_00104	0.34	+0.7
112,764	-		MIT1002_00104	0.36	+1.1
112,768	-		MIT1002_00104	0.37	+0.4
112,808	+		MIT1002_00104	0.43	+1.2
112,813	+		MIT1002_00104	0.43	+0.6
112,821	+		MIT1002_00104	0.44	+1.2
112,821	-		MIT1002_00104	0.44	+0.8
112,821	-		MIT1002_00104	0.44	-0.5
112,821	-		MIT1002_00104	0.44	+1.0
112,821	-		MIT1002_00104	0.44	-0.6
112,821	-		MIT1002_00104	0.44	-2.5
112,914	-		MIT1002_00104	0.58	-2.0
112,923	+		MIT1002_00104	0.60	-2.2
112,923	+		MIT1002_00104	0.60	+0.9
112,923	+		MIT1002_00104	0.60	-0.4
112,923	+		MIT1002_00104	0.60	-2.0
112,931	-		MIT1002_00104	0.61	-3.1
112,965	+		MIT1002_00104	0.66	+2.0
113,013	-		MIT1002_00104	0.73	-2.4
113,027	-		MIT1002_00104	0.75	+0.3
113,067	+		MIT1002_00104	0.81	-2.6
113,067	+		MIT1002_00104	0.81	-1.2
113,067	+		MIT1002_00104	0.81	-2.6
113,075	-		MIT1002_00104	0.82	+0.3
113,075	-		MIT1002_00104	0.82	+0.6
113,075	-		MIT1002_00104	0.82	-0.2
113,075	-		MIT1002_00104	0.82	-0.4
113,075	-		MIT1002_00104	0.82	+0.9
113,075	-		MIT1002_00104	0.82	-1.5
113,075	-		MIT1002_00104	0.82	+0.2
113,075	-		MIT1002_00104	0.82	-0.4
113,086	-		MIT1002_00104	0.84	-3.4
113,095	+		MIT1002_00104	0.85	+0.9
113,124	+		MIT1002_00104	0.90	+1.1
113,145	-				-0.2
113,158	+				+0.6
113,165	-				+1.2
113,166	-				+1.5
113,181	-				+0.7
113,207	+				-0.4