Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00063

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
67,879	+		MIT1002_00062	0.67	-0.3
67,879	+		MIT1002_00062	0.67	-0.0
67,908	+		MIT1002_00062	0.68	-0.6
67,908	+		MIT1002_00062	0.68	+0.5
67,908	+		MIT1002_00062	0.68	-0.1
67,914	-		MIT1002_00062	0.68	-0.2
67,916	-		MIT1002_00062	0.68	+0.8
67,927	-		MIT1002_00062	0.69	+1.3
67,963	-		MIT1002_00062	0.70	-0.4
67,983	-		MIT1002_00062	0.71	+0.8
68,014	-		MIT1002_00062	0.72	+0.1
68,019	-		MIT1002_00062	0.73	-0.6
68,060	-		MIT1002_00062	0.74	-1.0
68,108	+		MIT1002_00062	0.76	-0.5
68,111	-		MIT1002_00062	0.76	+0.2
68,202	-		MIT1002_00062	0.80	+0.0
68,263	+		MIT1002_00062	0.83	-0.2
68,271	-		MIT1002_00062	0.83	-0.7
68,276	-		MIT1002_00062	0.83	-0.1
68,399	+		MIT1002_00062	0.88	+0.3
68,458	+				+1.2
68,471	-				-0.1
68,486	-				+0.1
68,587	+				+0.4
68,599	-				-1.5
68,627	-				+0.3
68,650	-				-1.6
68,712	+				-1.9
68,712	+				+0.8
68,729	+				-0.2
68,730	-				+0.3
68,734	+				+0.6
68,769	+				+0.8
68,769	+				+2.8
68,777	-				+0.3
68,786	+				-1.2
68,786	+				+3.1
68,787	-				-1.0
68,794	-				+0.6
68,855	+				+0.3
68,985	+		MIT1002_00063	0.11	-0.6
69,054	+		MIT1002_00063	0.17	-1.1
69,162	-		MIT1002_00063	0.26	+0.8
69,224	-		MIT1002_00063	0.31	-1.7
69,257	-		MIT1002_00063	0.34	-0.0
69,269	+		MIT1002_00063	0.35	-0.5
69,277	+		MIT1002_00063	0.35	-3.0
69,287	+		MIT1002_00063	0.36	-1.9
69,287	+		MIT1002_00063	0.36	-0.7
69,307	-		MIT1002_00063	0.38	-2.4
69,344	+		MIT1002_00063	0.41	-1.0
69,466	-		MIT1002_00063	0.51	-1.2
69,526	+		MIT1002_00063	0.56	+1.6
69,533	+		MIT1002_00063	0.57	-0.2
69,548	-		MIT1002_00063	0.58	+0.4
69,585	+		MIT1002_00063	0.61	-2.4
69,585	+		MIT1002_00063	0.61	+0.6
69,590	+		MIT1002_00063	0.62	-0.7
69,593	-		MIT1002_00063	0.62	+0.7
69,593	-		MIT1002_00063	0.62	+2.0
69,607	+		MIT1002_00063	0.63	-3.0
69,715	-		MIT1002_00063	0.72	-0.1
69,761	-		MIT1002_00063	0.76	+0.6
69,761	-		MIT1002_00063	0.76	+3.2
69,917	+		MIT1002_00063	0.89	-0.6
69,925	-		MIT1002_00063	0.90	+0.0
69,933	-				-3.1
69,939	+				-0.8
69,939	+				+0.8
69,939	+				+0.3
69,947	-				+0.3
69,962	+				-0.4
69,972	+				+0.2
69,979	+				-0.1
69,979	+				+0.0
69,980	-				-0.3
69,981	-				+0.8
69,987	-				+0.0
70,093	+				-1.2
70,105	+				-0.4
70,124	-				-2.4
70,217	+		MIT1002_00064	0.17	-2.0
70,278	+		MIT1002_00064	0.23	+0.2
70,278	+		MIT1002_00064	0.23	+0.2
70,278	+		MIT1002_00064	0.23	-0.4
70,278	+		MIT1002_00064	0.23	+0.6
70,279	+		MIT1002_00064	0.23	+0.1
70,279	+		MIT1002_00064	0.23	+1.6
70,286	-		MIT1002_00064	0.23	-1.5
70,286	-		MIT1002_00064	0.23	+0.0
70,286	-		MIT1002_00064	0.23	-0.2
70,286	-		MIT1002_00064	0.23	-1.4
70,349	-		MIT1002_00064	0.30	-0.4
70,380	+		MIT1002_00064	0.33	-2.9
70,478	-		MIT1002_00064	0.42	-2.1
70,505	+		MIT1002_00064	0.45	-2.9
70,557	-		MIT1002_00064	0.50	-0.4
70,605	-		MIT1002_00064	0.54	+0.4
70,630	+		MIT1002_00064	0.57	+0.0
70,644	+		MIT1002_00064	0.58	-0.2
70,652	-		MIT1002_00064	0.59	-0.7
70,803	-		MIT1002_00064	0.74	+1.4
70,828	+		MIT1002_00064	0.76	-1.0
70,839	-		MIT1002_00064	0.77	-0.4
70,918	+		MIT1002_00064	0.85	+0.7
70,967	-		MIT1002_00064	0.90	-2.4
71,039	-				+1.6
71,039	-				+0.2