Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS35960

Experiment: Fumaric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fumaric (C)
1,447,928	+		QEN71_RS35955	0.39	-0.8
1,447,928	+		QEN71_RS35955	0.39	-1.8
1,447,951	+		QEN71_RS35955	0.41	-0.4
1,447,951	+		QEN71_RS35955	0.41	-0.3
1,447,951	+		QEN71_RS35955	0.41	-2.0
1,447,951	+		QEN71_RS35955	0.41	-1.1
1,447,951	+		QEN71_RS35955	0.41	-0.5
1,447,951	+		QEN71_RS35955	0.41	+1.7
1,447,952	-		QEN71_RS35955	0.41	-0.0
1,447,952	-		QEN71_RS35955	0.41	-0.7
1,448,014	+		QEN71_RS35955	0.46	+0.5
1,448,014	+		QEN71_RS35955	0.46	+0.1
1,448,014	+		QEN71_RS35955	0.46	-0.6
1,448,053	+		QEN71_RS35955	0.49	+1.0
1,448,054	-		QEN71_RS35955	0.49	+0.1
1,448,054	-		QEN71_RS35955	0.49	-0.5
1,448,113	+		QEN71_RS35955	0.53	+0.8
1,448,114	-		QEN71_RS35955	0.54	+2.3
1,448,114	-		QEN71_RS35955	0.54	-1.2
1,448,114	-		QEN71_RS35955	0.54	+0.7
1,448,114	-		QEN71_RS35955	0.54	-1.6
1,448,143	+		QEN71_RS35955	0.56	-0.4
1,448,143	+		QEN71_RS35955	0.56	+0.1
1,448,143	+		QEN71_RS35955	0.56	-0.3
1,448,144	-		QEN71_RS35955	0.56	-2.3
1,448,144	-		QEN71_RS35955	0.56	+0.1
1,448,144	-		QEN71_RS35955	0.56	-0.9
1,448,144	-		QEN71_RS35955	0.56	+1.3
1,448,144	-		QEN71_RS35955	0.56	-0.3
1,448,312	+		QEN71_RS35955	0.69	+0.8
1,448,420	-		QEN71_RS35955	0.77	-0.9
1,448,446	+		QEN71_RS35955	0.79	+0.7
1,448,446	+		QEN71_RS35955	0.79	+1.0
1,448,446	+		QEN71_RS35955	0.79	+0.7
1,448,447	-		QEN71_RS35955	0.79	+0.0
1,448,575	+		QEN71_RS35955	0.89	-0.3
1,448,576	-		QEN71_RS35955	0.89	-0.3
1,448,626	+				+2.3
1,448,626	+				-0.7
1,448,652	+				+1.4
1,448,653	-				-0.6
1,448,669	+				+0.9
1,448,728	-				+0.1
1,448,759	+				+1.2
1,448,759	+				+0.2
1,448,759	+				+0.2
1,448,760	-				+1.0
1,448,760	-				+0.3
1,448,760	-				-0.1
1,448,816	-				-0.2
1,448,822	-				-0.9
1,448,833	-				+1.0
1,448,833	-				+0.7
1,448,848	+				-0.1
1,448,848	+				+0.0
1,448,848	+				-0.2
1,448,848	+				+0.9
1,448,848	+				-0.6
1,448,849	-				-0.0
1,448,849	-				+0.3
1,448,849	-				+0.0
1,448,911	-				-1.2
1,448,920	-				+0.4
1,448,966	+				-0.1
1,448,967	-				+0.0
1,449,028	+		QEN71_RS35960	0.13	+1.0
1,449,034	+		QEN71_RS35960	0.14	-1.1
1,449,035	-		QEN71_RS35960	0.14	+2.0
1,449,035	-		QEN71_RS35960	0.14	+1.3
1,449,042	+		QEN71_RS35960	0.15	+0.9
1,449,042	+		QEN71_RS35960	0.15	+0.5
1,449,168	+		QEN71_RS35960	0.31	-0.4
1,449,169	-		QEN71_RS35960	0.31	-0.1
1,449,365	+		QEN71_RS35960	0.55	+0.5
1,449,365	+		QEN71_RS35960	0.55	-0.5
1,449,366	-		QEN71_RS35960	0.56	+0.1
1,449,366	-		QEN71_RS35960	0.56	-0.0
1,449,366	-		QEN71_RS35960	0.56	-0.8
1,449,366	-		QEN71_RS35960	0.56	+0.2
1,449,366	-		QEN71_RS35960	0.56	+0.0
1,449,366	-		QEN71_RS35960	0.56	-1.0
1,449,368	+		QEN71_RS35960	0.56	+0.4
1,449,368	+		QEN71_RS35960	0.56	+0.1
1,449,368	+		QEN71_RS35960	0.56	+0.0
1,449,368	+		QEN71_RS35960	0.56	+0.0
1,449,368	+		QEN71_RS35960	0.56	-0.6
1,449,368	+		QEN71_RS35960	0.56	+0.3
1,449,368	+		QEN71_RS35960	0.56	-0.6
1,449,369	-		QEN71_RS35960	0.56	-1.8
1,449,369	-		QEN71_RS35960	0.56	+1.0
1,449,369	-		QEN71_RS35960	0.56	+1.0
1,449,369	-		QEN71_RS35960	0.56	-0.4
1,449,369	-		QEN71_RS35960	0.56	-0.3
1,449,369	-		QEN71_RS35960	0.56	+0.5
1,449,369	-		QEN71_RS35960	0.56	+1.0
1,449,369	-		QEN71_RS35960	0.56	-0.8
1,449,369	-		QEN71_RS35960	0.56	-2.7
1,449,369	-		QEN71_RS35960	0.56	+0.2
1,449,369	-		QEN71_RS35960	0.56	+0.4
1,449,374	+		QEN71_RS35960	0.57	+0.7
1,449,374	+		QEN71_RS35960	0.57	-0.5
1,449,374	+		QEN71_RS35960	0.57	-2.1
1,449,374	+		QEN71_RS35960	0.57	-1.0
1,449,374	+		QEN71_RS35960	0.57	-1.1
1,449,374	+		QEN71_RS35960	0.57	-0.8
1,449,374	+		QEN71_RS35960	0.57	+0.9
1,449,374	+		QEN71_RS35960	0.57	+0.0
1,449,374	+		QEN71_RS35960	0.57	-0.6
1,449,374	+		QEN71_RS35960	0.57	-1.5
1,449,374	+		QEN71_RS35960	0.57	-0.7
1,449,374	+		QEN71_RS35960	0.57	-0.1
1,449,375	-		QEN71_RS35960	0.57	-0.5
1,449,375	-		QEN71_RS35960	0.57	-1.4
1,449,375	-		QEN71_RS35960	0.57	+1.5
1,449,375	-		QEN71_RS35960	0.57	-0.3
1,449,375	-		QEN71_RS35960	0.57	+0.1
1,449,375	-		QEN71_RS35960	0.57	-0.5
1,449,375	-		QEN71_RS35960	0.57	-0.7
1,449,375	-		QEN71_RS35960	0.57	+0.4
1,449,375	-		QEN71_RS35960	0.57	-0.5
1,449,375	-		QEN71_RS35960	0.57	+0.4
1,449,375	-		QEN71_RS35960	0.57	+0.4
1,449,375	-		QEN71_RS35960	0.57	+0.0
1,449,375	-		QEN71_RS35960	0.57	+1.0
1,449,375	-		QEN71_RS35960	0.57	-1.9
1,449,438	-		QEN71_RS35960	0.65	-0.1
1,449,438	-		QEN71_RS35960	0.65	+1.3
1,449,438	-		QEN71_RS35960	0.65	-0.3
1,449,438	-		QEN71_RS35960	0.65	-0.3
1,449,462	+		QEN71_RS35960	0.68	+0.8
1,449,462	+		QEN71_RS35960	0.68	-0.9
1,449,462	+		QEN71_RS35960	0.68	+0.4
1,449,463	-		QEN71_RS35960	0.68	+0.0
1,449,716	+				+0.0
1,449,716	+				-0.8
1,449,717	-				-0.6
1,449,717	-				+0.1
1,449,717	-				-0.2
1,449,717	-				+0.7
1,449,717	-				-1.1
1,449,720	+				+0.7
1,449,720	+				-0.7
1,449,720	+				+0.4
1,449,720	+				+0.7
1,449,720	+				+1.0
1,449,720	+				-0.3
1,449,720	+				+0.2
1,449,720	+				-1.6
1,449,721	-				-0.1
1,449,721	-				-0.7
1,449,721	-				-0.7
1,449,721	-				-0.7
1,449,721	-				+0.5
1,449,721	-				-0.0
1,449,721	-				-2.1
1,449,721	-				+0.0
1,449,739	+				-0.8
1,449,740	-				+1.4
1,449,855	+				+0.6
1,449,979	-				+0.9
1,450,162	+		QEN71_RS35965	0.11	-0.9
1,450,162	+		QEN71_RS35965	0.11	-0.5
1,450,162	+		QEN71_RS35965	0.11	+0.2
1,450,163	-		QEN71_RS35965	0.11	+0.4
1,450,163	-		QEN71_RS35965	0.11	+1.0
1,450,163	-		QEN71_RS35965	0.11	-0.3
1,450,163	-		QEN71_RS35965	0.11	-0.2
1,450,360	+		QEN71_RS35965	0.18	+0.0
1,450,360	+		QEN71_RS35965	0.18	+0.1
1,450,360	+		QEN71_RS35965	0.18	+1.4
1,450,360	+		QEN71_RS35965	0.18	+0.3
1,450,360	+		QEN71_RS35965	0.18	+1.3
1,450,360	+		QEN71_RS35965	0.18	+1.8
1,450,361	-		QEN71_RS35965	0.18	-0.3
1,450,361	-		QEN71_RS35965	0.18	+0.4
1,450,361	-		QEN71_RS35965	0.18	+1.2
1,450,361	-		QEN71_RS35965	0.18	+0.4
1,450,361	-		QEN71_RS35965	0.18	-0.2
1,450,362	+		QEN71_RS35965	0.18	-0.8
1,450,362	+		QEN71_RS35965	0.18	-0.3
1,450,363	-		QEN71_RS35965	0.18	-0.3
1,450,363	-		QEN71_RS35965	0.18	+1.0
1,450,363	-		QEN71_RS35965	0.18	+0.2
1,450,401	-		QEN71_RS35965	0.19	+0.4
1,450,504	+		QEN71_RS35965	0.22	+0.1
1,450,504	+		QEN71_RS35965	0.22	+0.3
1,450,504	+		QEN71_RS35965	0.22	-1.2
1,450,504	+		QEN71_RS35965	0.22	+0.9
1,450,504	+		QEN71_RS35965	0.22	-1.8
1,450,504	+		QEN71_RS35965	0.22	+0.1
1,450,504	+		QEN71_RS35965	0.22	+0.2
1,450,505	-		QEN71_RS35965	0.22	+0.0
1,450,505	-		QEN71_RS35965	0.22	-0.0
1,450,505	-		QEN71_RS35965	0.22	+0.9
1,450,505	-		QEN71_RS35965	0.22	+0.1
1,450,505	-		QEN71_RS35965	0.22	-0.4
1,450,505	-		QEN71_RS35965	0.22	+2.1
1,450,505	-		QEN71_RS35965	0.22	-0.5
1,450,505	-		QEN71_RS35965	0.22	-0.7
1,450,627	-		QEN71_RS35965	0.27	+0.7
1,450,639	+		QEN71_RS35965	0.27	-0.8
1,450,642	+		QEN71_RS35965	0.27	-0.2
1,450,642	+		QEN71_RS35965	0.27	-0.3
1,450,642	+		QEN71_RS35965	0.27	+0.3
1,450,642	+		QEN71_RS35965	0.27	+0.3
1,450,642	+		QEN71_RS35965	0.27	+0.0
1,450,642	+		QEN71_RS35965	0.27	+1.1
1,450,642	+		QEN71_RS35965	0.27	+1.8
1,450,642	+		QEN71_RS35965	0.27	+0.0
1,450,642	+		QEN71_RS35965	0.27	-0.4
1,450,642	+		QEN71_RS35965	0.27	+0.2
1,450,642	+		QEN71_RS35965	0.27	+0.3
1,450,643	-		QEN71_RS35965	0.27	-0.1
1,450,643	-		QEN71_RS35965	0.27	+0.2
1,450,643	-		QEN71_RS35965	0.27	+0.5
1,450,643	-		QEN71_RS35965	0.27	+0.1
1,450,643	-		QEN71_RS35965	0.27	+0.0
1,450,643	-		QEN71_RS35965	0.27	-1.0
1,450,643	-		QEN71_RS35965	0.27	-0.9
1,450,643	-		QEN71_RS35965	0.27	+0.0
1,450,643	-		QEN71_RS35965	0.27	-0.3
1,450,643	-		QEN71_RS35965	0.27	-0.8
1,450,643	-		QEN71_RS35965	0.27	+0.4