Experiment: Fumaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS24755 and QEN71_RS24760 are separated by 191 nucleotides QEN71_RS24760 and QEN71_RS24765 are separated by 136 nucleotides QEN71_RS24765 and QEN71_RS24770 are separated by 132 nucleotides QEN71_RS24770 and QEN71_RS24775 are separated by 91 nucleotides
QEN71_RS24755: QEN71_RS24755 - very short patch repair endonuclease, at 5,507,391 to 5,507,837
_RS24755
QEN71_RS24760: QEN71_RS24760 - YbhB/YbcL family Raf kinase inhibitor-like protein, at 5,508,029 to 5,508,538
_RS24760
QEN71_RS24765: QEN71_RS24765 - MFS transporter, at 5,508,675 to 5,510,105
_RS24765
QEN71_RS24770: QEN71_RS24770 - hypothetical protein, at 5,510,238 to 5,510,825
_RS24770
QEN71_RS24775: QEN71_RS24775 - alpha,alpha-trehalose-phosphate synthase (UDP-forming), at 5,510,917 to 5,512,338
_RS24775
Position (kb) 5508
5509
5510
5511 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5507.765 kb on + strand, within QEN71_RS24755 at 5507.766 kb on - strand, within QEN71_RS24755 at 5507.766 kb on - strand, within QEN71_RS24755 at 5507.918 kb on + strand at 5507.918 kb on + strand at 5507.918 kb on + strand at 5507.918 kb on + strand at 5507.918 kb on + strand at 5507.918 kb on + strand at 5507.918 kb on + strand at 5507.918 kb on + strand at 5507.919 kb on - strand at 5507.919 kb on - strand at 5507.919 kb on - strand at 5507.919 kb on - strand at 5507.919 kb on - strand at 5507.919 kb on - strand at 5507.919 kb on - strand at 5507.919 kb on - strand at 5507.919 kb on - strand at 5507.969 kb on + strand at 5507.969 kb on + strand at 5507.969 kb on + strand at 5507.969 kb on + strand at 5507.969 kb on + strand at 5507.969 kb on + strand at 5507.969 kb on + strand at 5507.969 kb on + strand at 5507.970 kb on - strand at 5507.970 kb on - strand at 5507.970 kb on - strand at 5507.970 kb on - strand at 5507.970 kb on - strand at 5507.970 kb on - strand at 5508.344 kb on + strand, within QEN71_RS24760 at 5508.344 kb on + strand, within QEN71_RS24760 at 5508.345 kb on - strand, within QEN71_RS24760 at 5508.345 kb on - strand, within QEN71_RS24760 at 5508.345 kb on - strand, within QEN71_RS24760 at 5508.476 kb on + strand, within QEN71_RS24760 at 5508.476 kb on + strand, within QEN71_RS24760 at 5508.476 kb on + strand, within QEN71_RS24760 at 5508.476 kb on + strand, within QEN71_RS24760 at 5508.476 kb on + strand, within QEN71_RS24760 at 5508.476 kb on + strand, within QEN71_RS24760 at 5508.476 kb on + strand, within QEN71_RS24760 at 5508.476 kb on + strand, within QEN71_RS24760 at 5508.477 kb on - strand, within QEN71_RS24760 at 5508.478 kb on + strand, within QEN71_RS24760 at 5508.478 kb on + strand, within QEN71_RS24760 at 5508.478 kb on + strand, within QEN71_RS24760 at 5508.478 kb on + strand, within QEN71_RS24760 at 5508.478 kb on + strand, within QEN71_RS24760 at 5508.478 kb on + strand, within QEN71_RS24760 at 5508.478 kb on + strand, within QEN71_RS24760 at 5508.478 kb on + strand, within QEN71_RS24760 at 5508.478 kb on + strand, within QEN71_RS24760 at 5508.478 kb on + strand, within QEN71_RS24760 at 5508.478 kb on + strand, within QEN71_RS24760 at 5508.479 kb on - strand, within QEN71_RS24760 at 5508.479 kb on - strand, within QEN71_RS24760 at 5508.479 kb on - strand, within QEN71_RS24760 at 5508.479 kb on - strand, within QEN71_RS24760 at 5508.512 kb on + strand at 5508.512 kb on + strand at 5508.512 kb on + strand at 5508.513 kb on - strand at 5508.513 kb on - strand at 5508.513 kb on - strand at 5508.513 kb on - strand at 5508.513 kb on - strand at 5508.513 kb on - strand at 5508.524 kb on + strand at 5508.524 kb on + strand at 5508.524 kb on + strand at 5508.524 kb on + strand at 5508.524 kb on + strand at 5508.524 kb on + strand at 5508.525 kb on - strand at 5508.525 kb on - strand at 5508.525 kb on - strand at 5508.536 kb on + strand at 5508.536 kb on + strand at 5508.537 kb on - strand at 5508.560 kb on + strand at 5508.560 kb on + strand at 5508.560 kb on + strand at 5508.560 kb on + strand at 5508.560 kb on + strand at 5508.560 kb on + strand at 5508.560 kb on + strand at 5508.560 kb on + strand at 5508.560 kb on + strand at 5508.560 kb on + strand at 5508.561 kb on - strand at 5508.561 kb on - strand at 5508.561 kb on - strand at 5508.561 kb on - strand at 5508.561 kb on - strand at 5508.561 kb on - strand at 5508.561 kb on - strand at 5508.777 kb on + strand at 5508.912 kb on + strand, within QEN71_RS24765 at 5508.913 kb on - strand, within QEN71_RS24765 at 5508.984 kb on + strand, within QEN71_RS24765 at 5508.984 kb on + strand, within QEN71_RS24765 at 5508.984 kb on + strand, within QEN71_RS24765 at 5508.984 kb on + strand, within QEN71_RS24765 at 5508.985 kb on - strand, within QEN71_RS24765 at 5509.131 kb on + strand, within QEN71_RS24765 at 5509.131 kb on + strand, within QEN71_RS24765 at 5509.131 kb on + strand, within QEN71_RS24765 at 5509.132 kb on - strand, within QEN71_RS24765 at 5509.132 kb on - strand, within QEN71_RS24765 at 5509.132 kb on - strand, within QEN71_RS24765 at 5509.335 kb on + strand, within QEN71_RS24765 at 5509.336 kb on - strand, within QEN71_RS24765 at 5509.336 kb on - strand, within QEN71_RS24765 at 5509.336 kb on - strand, within QEN71_RS24765 at 5509.336 kb on - strand, within QEN71_RS24765 at 5509.342 kb on - strand, within QEN71_RS24765 at 5509.464 kb on + strand, within QEN71_RS24765 at 5509.464 kb on + strand, within QEN71_RS24765 at 5509.526 kb on + strand, within QEN71_RS24765 at 5509.526 kb on + strand, within QEN71_RS24765 at 5509.526 kb on + strand, within QEN71_RS24765 at 5509.526 kb on + strand, within QEN71_RS24765 at 5509.526 kb on + strand, within QEN71_RS24765 at 5509.527 kb on - strand, within QEN71_RS24765 at 5509.527 kb on - strand, within QEN71_RS24765 at 5509.527 kb on - strand, within QEN71_RS24765 at 5510.025 kb on + strand at 5510.025 kb on + strand at 5510.025 kb on + strand at 5510.025 kb on + strand at 5510.025 kb on + strand at 5510.025 kb on + strand at 5510.025 kb on + strand at 5510.026 kb on - strand at 5510.026 kb on - strand at 5510.026 kb on - strand at 5510.026 kb on - strand at 5510.026 kb on - strand at 5510.026 kb on - strand at 5510.026 kb on - strand at 5510.136 kb on + strand at 5510.137 kb on - strand at 5510.137 kb on - strand at 5510.137 kb on - strand at 5510.144 kb on + strand at 5510.144 kb on + strand at 5510.145 kb on - strand at 5510.553 kb on + strand, within QEN71_RS24770 at 5510.553 kb on + strand, within QEN71_RS24770 at 5510.553 kb on + strand, within QEN71_RS24770 at 5510.553 kb on + strand, within QEN71_RS24770 at 5510.554 kb on - strand, within QEN71_RS24770 at 5510.554 kb on - strand, within QEN71_RS24770 at 5510.554 kb on - strand, within QEN71_RS24770 at 5510.554 kb on - strand, within QEN71_RS24770 at 5510.554 kb on - strand, within QEN71_RS24770 at 5510.554 kb on - strand, within QEN71_RS24770 at 5510.913 kb on + strand at 5510.913 kb on + strand at 5510.914 kb on - strand at 5510.914 kb on - strand at 5510.914 kb on - strand at 5510.914 kb on - strand at 5511.000 kb on + strand at 5511.000 kb on + strand at 5511.000 kb on + strand at 5511.000 kb on + strand at 5511.001 kb on - strand at 5511.001 kb on - strand at 5511.001 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fumaric (C) remove 5,507,765 + QEN71_RS24755 0.84 -1.9 5,507,766 - QEN71_RS24755 0.84 -0.3 5,507,766 - QEN71_RS24755 0.84 +0.3 5,507,918 + -0.6 5,507,918 + -0.1 5,507,918 + -1.0 5,507,918 + -2.0 5,507,918 + -0.5 5,507,918 + -0.3 5,507,918 + +0.5 5,507,918 + +1.1 5,507,919 - -0.2 5,507,919 - +0.6 5,507,919 - -0.5 5,507,919 - -0.1 5,507,919 - +0.1 5,507,919 - -1.6 5,507,919 - +0.4 5,507,919 - -1.5 5,507,919 - -0.3 5,507,969 + -0.5 5,507,969 + +0.8 5,507,969 + -0.0 5,507,969 + -0.4 5,507,969 + -0.2 5,507,969 + -0.2 5,507,969 + -0.3 5,507,969 + -0.2 5,507,970 - +0.4 5,507,970 - -0.5 5,507,970 - +1.7 5,507,970 - +0.4 5,507,970 - +0.3 5,507,970 - -0.1 5,508,344 + QEN71_RS24760 0.62 -0.3 5,508,344 + QEN71_RS24760 0.62 -0.5 5,508,345 - QEN71_RS24760 0.62 -0.4 5,508,345 - QEN71_RS24760 0.62 +0.1 5,508,345 - QEN71_RS24760 0.62 +1.6 5,508,476 + QEN71_RS24760 0.88 -0.3 5,508,476 + QEN71_RS24760 0.88 -0.3 5,508,476 + QEN71_RS24760 0.88 -0.4 5,508,476 + QEN71_RS24760 0.88 -1.1 5,508,476 + QEN71_RS24760 0.88 -0.8 5,508,476 + QEN71_RS24760 0.88 +0.3 5,508,476 + QEN71_RS24760 0.88 -0.2 5,508,476 + QEN71_RS24760 0.88 -0.6 5,508,477 - QEN71_RS24760 0.88 -0.6 5,508,478 + QEN71_RS24760 0.88 -1.4 5,508,478 + QEN71_RS24760 0.88 -0.6 5,508,478 + QEN71_RS24760 0.88 +0.2 5,508,478 + QEN71_RS24760 0.88 +0.1 5,508,478 + QEN71_RS24760 0.88 +0.3 5,508,478 + QEN71_RS24760 0.88 +1.1 5,508,478 + QEN71_RS24760 0.88 -0.7 5,508,478 + QEN71_RS24760 0.88 -0.1 5,508,478 + QEN71_RS24760 0.88 -0.2 5,508,478 + QEN71_RS24760 0.88 -0.5 5,508,478 + QEN71_RS24760 0.88 +1.2 5,508,479 - QEN71_RS24760 0.88 -1.3 5,508,479 - QEN71_RS24760 0.88 -0.3 5,508,479 - QEN71_RS24760 0.88 +0.2 5,508,479 - QEN71_RS24760 0.88 +0.4 5,508,512 + -1.3 5,508,512 + -0.6 5,508,512 + -2.1 5,508,513 - -1.1 5,508,513 - -0.2 5,508,513 - +0.7 5,508,513 - +0.4 5,508,513 - +0.8 5,508,513 - -1.1 5,508,524 + +0.1 5,508,524 + +0.5 5,508,524 + -0.2 5,508,524 + -2.3 5,508,524 + -0.7 5,508,524 + +0.1 5,508,525 - +0.5 5,508,525 - -0.1 5,508,525 - -1.7 5,508,536 + +0.2 5,508,536 + +0.4 5,508,537 - +1.6 5,508,560 + -1.9 5,508,560 + -2.0 5,508,560 + -0.3 5,508,560 + -1.7 5,508,560 + -2.1 5,508,560 + +0.4 5,508,560 + -0.6 5,508,560 + -0.8 5,508,560 + +0.7 5,508,560 + -0.6 5,508,561 - +0.3 5,508,561 - +0.1 5,508,561 - -0.7 5,508,561 - +1.4 5,508,561 - +1.2 5,508,561 - -1.1 5,508,561 - +1.0 5,508,777 + +0.2 5,508,912 + QEN71_RS24765 0.17 +0.7 5,508,913 - QEN71_RS24765 0.17 +0.0 5,508,984 + QEN71_RS24765 0.22 +0.8 5,508,984 + QEN71_RS24765 0.22 -1.5 5,508,984 + QEN71_RS24765 0.22 -2.0 5,508,984 + QEN71_RS24765 0.22 -0.5 5,508,985 - QEN71_RS24765 0.22 +2.4 5,509,131 + QEN71_RS24765 0.32 -0.5 5,509,131 + QEN71_RS24765 0.32 -2.7 5,509,131 + QEN71_RS24765 0.32 -0.1 5,509,132 - QEN71_RS24765 0.32 -0.9 5,509,132 - QEN71_RS24765 0.32 -1.5 5,509,132 - QEN71_RS24765 0.32 +0.0 5,509,335 + QEN71_RS24765 0.46 +0.6 5,509,336 - QEN71_RS24765 0.46 +0.6 5,509,336 - QEN71_RS24765 0.46 +0.3 5,509,336 - QEN71_RS24765 0.46 -1.2 5,509,336 - QEN71_RS24765 0.46 +0.6 5,509,342 - QEN71_RS24765 0.47 +0.1 5,509,464 + QEN71_RS24765 0.55 +0.1 5,509,464 + QEN71_RS24765 0.55 +0.3 5,509,526 + QEN71_RS24765 0.59 -0.5 5,509,526 + QEN71_RS24765 0.59 +1.1 5,509,526 + QEN71_RS24765 0.59 +0.5 5,509,526 + QEN71_RS24765 0.59 -0.8 5,509,526 + QEN71_RS24765 0.59 -0.3 5,509,527 - QEN71_RS24765 0.60 -0.8 5,509,527 - QEN71_RS24765 0.60 +0.1 5,509,527 - QEN71_RS24765 0.60 -0.1 5,510,025 + -1.1 5,510,025 + -0.2 5,510,025 + +0.2 5,510,025 + -0.1 5,510,025 + +0.7 5,510,025 + +0.7 5,510,025 + +0.7 5,510,026 - +1.1 5,510,026 - +0.7 5,510,026 - +0.4 5,510,026 - +1.1 5,510,026 - -0.3 5,510,026 - -0.4 5,510,026 - -0.1 5,510,136 + +1.1 5,510,137 - -0.0 5,510,137 - -0.3 5,510,137 - -0.4 5,510,144 + +0.0 5,510,144 + -1.3 5,510,145 - -0.3 5,510,553 + QEN71_RS24770 0.54 -1.8 5,510,553 + QEN71_RS24770 0.54 +0.8 5,510,553 + QEN71_RS24770 0.54 +0.1 5,510,553 + QEN71_RS24770 0.54 -0.7 5,510,554 - QEN71_RS24770 0.54 +0.0 5,510,554 - QEN71_RS24770 0.54 -0.6 5,510,554 - QEN71_RS24770 0.54 -2.2 5,510,554 - QEN71_RS24770 0.54 +0.1 5,510,554 - QEN71_RS24770 0.54 +0.3 5,510,554 - QEN71_RS24770 0.54 +0.2 5,510,913 + +0.0 5,510,913 + -1.6 5,510,914 - -0.5 5,510,914 - -0.9 5,510,914 - +0.6 5,510,914 - -1.1 5,511,000 + -1.6 5,511,000 + -1.6 5,511,000 + -2.1 5,511,000 + -1.5 5,511,001 - -0.8 5,511,001 - -0.8 5,511,001 - -1.3
Or see this region's nucleotide sequence