Experiment: Fumaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS21390 and QEN71_RS21395 are separated by 67 nucleotides QEN71_RS21395 and QEN71_RS21400 are separated by 72 nucleotides QEN71_RS21400 and QEN71_RS21405 are separated by 46 nucleotides
QEN71_RS21390: QEN71_RS21390 - poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, at 4,740,473 to 4,742,515
_RS21390
QEN71_RS21395: QEN71_RS21395 - poly-beta-1,6-N-acetyl-D-glucosamine synthase, at 4,742,583 to 4,743,884
_RS21395
QEN71_RS21400: QEN71_RS21400 - hypothetical protein, at 4,743,957 to 4,744,412
_RS21400
QEN71_RS21405: QEN71_RS21405 - glutamine--fructose-6-phosphate transaminase (isomerizing), at 4,744,459 to 4,746,288
_RS21405
Position (kb) 4742
4743
4744 Strain fitness (log2 ratio) -1
0
1 at 4741.680 kb on - strand, within QEN71_RS21390 at 4741.842 kb on - strand, within QEN71_RS21390 at 4742.075 kb on + strand, within QEN71_RS21390 at 4742.075 kb on + strand, within QEN71_RS21390 at 4742.187 kb on - strand, within QEN71_RS21390 at 4742.582 kb on - strand at 4742.582 kb on - strand at 4742.610 kb on + strand at 4742.611 kb on - strand at 4742.631 kb on + strand at 4742.631 kb on + strand at 4742.661 kb on + strand at 4742.662 kb on - strand at 4742.749 kb on - strand, within QEN71_RS21395 at 4742.749 kb on - strand, within QEN71_RS21395 at 4742.811 kb on + strand, within QEN71_RS21395 at 4742.981 kb on + strand, within QEN71_RS21395 at 4742.982 kb on - strand, within QEN71_RS21395 at 4743.168 kb on + strand, within QEN71_RS21395 at 4743.168 kb on + strand, within QEN71_RS21395 at 4743.168 kb on + strand, within QEN71_RS21395 at 4743.168 kb on + strand, within QEN71_RS21395 at 4743.168 kb on + strand, within QEN71_RS21395 at 4743.168 kb on + strand, within QEN71_RS21395 at 4743.169 kb on - strand, within QEN71_RS21395 at 4743.169 kb on - strand, within QEN71_RS21395 at 4743.169 kb on - strand, within QEN71_RS21395 at 4743.169 kb on - strand, within QEN71_RS21395 at 4743.491 kb on - strand, within QEN71_RS21395 at 4743.676 kb on - strand, within QEN71_RS21395 at 4744.104 kb on + strand, within QEN71_RS21400 at 4744.104 kb on + strand, within QEN71_RS21400 at 4744.473 kb on - strand at 4744.473 kb on - strand at 4744.473 kb on - strand at 4744.543 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fumaric (C) remove 4,741,680 - QEN71_RS21390 0.59 +0.3 4,741,842 - QEN71_RS21390 0.67 -0.6 4,742,075 + QEN71_RS21390 0.78 +0.9 4,742,075 + QEN71_RS21390 0.78 -0.9 4,742,187 - QEN71_RS21390 0.84 -1.1 4,742,582 - +1.5 4,742,582 - -0.4 4,742,610 + +0.2 4,742,611 - +0.0 4,742,631 + -0.9 4,742,631 + -0.1 4,742,661 + +0.1 4,742,662 - -0.7 4,742,749 - QEN71_RS21395 0.13 -0.3 4,742,749 - QEN71_RS21395 0.13 +0.1 4,742,811 + QEN71_RS21395 0.18 -0.1 4,742,981 + QEN71_RS21395 0.31 +0.5 4,742,982 - QEN71_RS21395 0.31 +0.5 4,743,168 + QEN71_RS21395 0.45 -0.0 4,743,168 + QEN71_RS21395 0.45 -0.4 4,743,168 + QEN71_RS21395 0.45 +0.5 4,743,168 + QEN71_RS21395 0.45 +0.9 4,743,168 + QEN71_RS21395 0.45 -0.3 4,743,168 + QEN71_RS21395 0.45 -1.6 4,743,169 - QEN71_RS21395 0.45 -0.2 4,743,169 - QEN71_RS21395 0.45 -0.2 4,743,169 - QEN71_RS21395 0.45 -0.2 4,743,169 - QEN71_RS21395 0.45 +0.1 4,743,491 - QEN71_RS21395 0.70 -0.6 4,743,676 - QEN71_RS21395 0.84 -0.6 4,744,104 + QEN71_RS21400 0.32 -0.1 4,744,104 + QEN71_RS21400 0.32 -0.1 4,744,473 - -0.5 4,744,473 - -0.4 4,744,473 - -0.2 4,744,543 + -1.1
Or see this region's nucleotide sequence