Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS17690

Experiment: Fumaric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fumaric (C)
3,932,466	+		QEN71_RS17685	0.72	-0.9
3,932,467	-		QEN71_RS17685	0.72	-1.1
3,932,467	-		QEN71_RS17685	0.72	-0.9
3,932,493	+		QEN71_RS17685	0.74	-0.3
3,932,493	+		QEN71_RS17685	0.74	-0.1
3,932,494	-		QEN71_RS17685	0.75	+1.4
3,932,494	-		QEN71_RS17685	0.75	-1.6
3,932,494	-		QEN71_RS17685	0.75	+1.5
3,932,600	+		QEN71_RS17685	0.83	+0.0
3,932,654	+		QEN71_RS17685	0.88	-0.9
3,932,654	+		QEN71_RS17685	0.88	+1.1
3,932,655	-		QEN71_RS17685	0.88	+0.6
3,932,666	+		QEN71_RS17685	0.89	-2.3
3,932,666	+		QEN71_RS17685	0.89	-0.3
3,932,667	-		QEN71_RS17685	0.89	-0.3
3,932,667	-		QEN71_RS17685	0.89	+0.2
3,932,714	+				+0.4
3,932,714	+				-1.6
3,932,714	+				-1.2
3,932,715	-				-0.0
3,932,715	-				-1.2
3,932,715	-				-0.6
3,932,718	-				+0.1
3,932,718	-				+0.1
3,932,718	-				+1.2
3,932,758	+				+0.7
3,932,758	+				-0.2
3,932,758	+				+0.5
3,932,758	+				+0.7
3,932,758	+				+0.3
3,932,758	+				+0.3
3,932,758	+				-0.4
3,932,758	+				-0.4
3,932,758	+				-0.1
3,932,759	-				+0.1
3,932,759	-				+0.3
3,932,759	-				-0.2
3,932,759	-				-0.2
3,932,759	-				+0.9
3,932,759	-				+0.5
3,932,759	-				+0.1
3,932,759	-				-0.1
3,932,759	-				-0.9
3,932,759	-				+0.7
3,932,759	-				-0.3
3,932,759	-				+0.9
3,932,765	+				-1.4
3,932,765	+				+0.8
3,932,765	+				+0.2
3,932,765	+				+0.0
3,932,766	-				+0.2
3,932,766	-				+0.0
3,932,766	-				-0.3
3,932,794	-				-0.9
3,932,794	-				+0.7
3,932,794	-				+0.3
3,932,813	+				+0.9
3,933,035	+				-1.4
3,933,036	-				-0.0
3,933,036	-				+0.0
3,933,036	-				+0.4
3,933,244	-				-2.0
3,933,318	+				-0.1
3,933,318	+				-0.0
3,933,318	+				+0.1
3,933,428	+				+0.3
3,933,428	+				+0.1
3,933,429	-				-0.3
3,933,429	-				+0.4
3,933,456	-				-1.8
3,933,521	+				+0.4
3,933,521	+				+0.7
3,933,521	+				-0.7
3,933,521	+				-0.9
3,933,521	+				-0.5
3,933,521	+				+0.0
3,933,521	+				+1.1
3,933,521	+				+0.5
3,933,521	+				-0.6
3,933,522	-				-0.1
3,933,522	-				+0.5
3,933,522	-				-0.2
3,933,522	-				-0.0
3,933,522	-				-0.2
3,933,522	-				-0.3
3,933,522	-				-0.7
3,933,522	-				-0.2
3,933,522	-				-0.4
3,933,522	-				-1.0
3,933,522	-				-0.2
3,933,522	-				+0.4
3,933,522	-				-0.2
3,933,523	+				-1.4
3,933,523	+				+0.3
3,933,524	-				-1.3
3,933,524	-				+0.2
3,933,524	-				-0.1
3,933,628	+		QEN71_RS17690	0.22	+0.6
3,933,628	+		QEN71_RS17690	0.22	+0.1
3,933,628	+		QEN71_RS17690	0.22	-0.4
3,933,629	-		QEN71_RS17690	0.22	+0.4
3,933,659	+		QEN71_RS17690	0.26	+0.7
3,933,720	+		QEN71_RS17690	0.34	+0.6
3,933,721	-		QEN71_RS17690	0.34	+0.1
3,933,758	+		QEN71_RS17690	0.39	+1.2
3,933,882	-		QEN71_RS17690	0.55	+2.4
3,933,913	-		QEN71_RS17690	0.59	-2.7
3,934,036	+		QEN71_RS17690	0.75	-0.4
3,934,036	+		QEN71_RS17690	0.75	-0.7
3,934,036	+		QEN71_RS17690	0.75	-0.8
3,934,036	+		QEN71_RS17690	0.75	-1.2
3,934,037	-		QEN71_RS17690	0.75	-0.4
3,934,245	+				+0.2
3,934,246	-				-0.1
3,934,246	-				+0.0
3,934,312	+		QEN71_RS17695	0.15	-0.6
3,934,312	+		QEN71_RS17695	0.15	-1.7
3,934,369	+		QEN71_RS17695	0.32	-0.4
3,934,370	-		QEN71_RS17695	0.32	+0.2
3,934,455	+		QEN71_RS17695	0.57	-1.4
3,934,456	-		QEN71_RS17695	0.57	-0.5
3,934,505	+		QEN71_RS17695	0.71	-0.0
3,934,505	+		QEN71_RS17695	0.71	-1.9
3,934,506	-		QEN71_RS17695	0.72	-0.3
3,934,506	-		QEN71_RS17695	0.72	-0.7
3,934,568	+				-0.1
3,934,568	+				-0.3
3,934,568	+				-0.7
3,934,568	+				-1.9
3,934,568	+				-0.0
3,934,568	+				-1.3
3,934,569	-				-0.2
3,934,569	-				+0.3
3,934,569	-				+0.1
3,934,569	-				+0.9
3,934,569	-				-0.3
3,934,569	-				-0.2
3,934,569	-				-0.5
3,934,569	-				-0.7
3,934,597	-				-0.6
3,934,597	-				-0.4
3,934,597	-				+0.4
3,934,616	+				+0.8
3,934,616	+				-0.7
3,934,616	+				+0.8
3,934,616	+				+0.4
3,934,616	+				+0.4
3,934,617	-				-2.1
3,934,617	-				+0.1
3,934,617	-				+0.5
3,934,617	-				+0.0
3,934,617	-				-0.3
3,934,633	+				+0.8
3,934,633	+				-0.1
3,934,633	+				-1.3
3,934,633	+				-0.8
3,934,634	-				-0.1
3,934,638	+				-0.9
3,934,638	+				+0.3
3,934,638	+				-0.2
3,934,638	+				-1.3
3,934,638	+				+0.0
3,934,638	+				+1.9
3,934,638	+				-1.0
3,934,638	+				+0.1
3,934,639	-				+0.3
3,934,639	-				+0.1
3,934,639	-				-0.8
3,934,639	-				+0.2
3,934,639	-				+0.1
3,934,639	-				-0.5
3,934,652	+				-0.3
3,934,652	+				-0.3
3,934,653	-				-0.1
3,934,653	-				-0.2
3,934,653	-				+0.3
3,934,685	+				-0.4
3,934,685	+				+0.4
3,934,685	+				-0.6
3,934,685	+				-2.0
3,934,685	+				-1.3
3,934,685	+				-0.7
3,934,685	+				-0.3
3,934,685	+				-0.3
3,934,685	+				+0.3
3,934,685	+				-0.2
3,934,685	+				+0.3
3,934,685	+				+0.0
3,934,685	+				-0.9
3,934,685	+				+1.5
3,934,686	-				-2.0
3,934,686	-				+1.5
3,934,686	-				-0.6
3,934,686	-				-0.3
3,934,686	-				-0.3
3,934,686	-				-0.9
3,934,686	-				+0.2
3,934,686	-				+0.5
3,934,686	-				-3.0
3,934,686	-				-0.1
3,934,686	-				+0.3
3,934,686	-				-0.1
3,934,687	+				-1.1
3,934,687	+				-0.5
3,934,687	+				-0.4
3,934,687	+				-0.1
3,934,688	-				-0.4
3,934,688	-				+0.3
3,934,688	-				-0.3
3,934,688	-				-0.8
3,934,688	-				-0.3
3,934,688	-				+0.2
3,934,688	-				+0.3
3,934,747	+				-0.7
3,934,747	+				-3.3
3,934,748	-				-1.3
3,934,748	-				-1.5
3,934,748	-				-0.6
3,934,748	-				+0.6
3,934,748	-				-2.8
3,934,748	-				-0.8
3,934,748	-				-0.1
3,934,894	+		QEN71_RS17700	0.21	-2.2
3,934,894	+		QEN71_RS17700	0.21	+1.8
3,934,895	-		QEN71_RS17700	0.21	-1.6
3,934,895	-		QEN71_RS17700	0.21	-1.2
3,934,895	-		QEN71_RS17700	0.21	-0.7
3,934,895	-		QEN71_RS17700	0.21	-0.9
3,934,895	-		QEN71_RS17700	0.21	-1.3
3,934,895	-		QEN71_RS17700	0.21	-0.1
3,934,904	+		QEN71_RS17700	0.22	-0.1
3,934,904	+		QEN71_RS17700	0.22	-1.5
3,934,904	+		QEN71_RS17700	0.22	-1.3
3,934,904	+		QEN71_RS17700	0.22	+0.1
3,934,904	+		QEN71_RS17700	0.22	-0.1
3,934,904	+		QEN71_RS17700	0.22	-0.1
3,934,904	+		QEN71_RS17700	0.22	-1.4
3,934,905	-		QEN71_RS17700	0.22	-1.3
3,934,905	-		QEN71_RS17700	0.22	-1.1
3,934,905	-		QEN71_RS17700	0.22	-1.1
3,934,905	-		QEN71_RS17700	0.22	+1.3
3,934,964	-		QEN71_RS17700	0.30	+0.1
3,934,964	-		QEN71_RS17700	0.30	-1.0
3,934,996	-		QEN71_RS17700	0.34	-1.4
3,934,996	-		QEN71_RS17700	0.34	-0.9
3,934,996	-		QEN71_RS17700	0.34	-0.3