Experiment: Fumaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS00150 and QEN71_RS00155 are separated by 255 nucleotides QEN71_RS00155 and QEN71_RS00160 are separated by 23 nucleotides QEN71_RS00160 and QEN71_RS00165 are separated by 100 nucleotides QEN71_RS00165 and QEN71_RS00170 are separated by 103 nucleotides
QEN71_RS00150: QEN71_RS00150 - DNA-processing protein DprA, at 31,938 to 33,113
_RS00150
QEN71_RS00155: QEN71_RS00155 - peptide deformylase, at 33,369 to 33,872
_RS00155
QEN71_RS00160: QEN71_RS00160 - methionyl-tRNA formyltransferase, at 33,896 to 34,879
_RS00160
QEN71_RS00165: QEN71_RS00165 - LysE family translocator, at 34,980 to 35,621
_RS00165
QEN71_RS00170: QEN71_RS00170 - zinc metalloprotease HtpX, at 35,725 to 36,582
_RS00170
Position (kb) 33
34
35 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 32.944 kb on - strand, within QEN71_RS00150 at 33.272 kb on + strand at 33.272 kb on + strand at 33.272 kb on + strand at 33.276 kb on + strand at 33.276 kb on + strand at 33.276 kb on + strand at 33.276 kb on + strand at 33.276 kb on + strand at 33.276 kb on + strand at 33.276 kb on + strand at 33.276 kb on + strand at 33.276 kb on + strand at 33.276 kb on + strand at 33.276 kb on + strand at 33.276 kb on + strand at 33.276 kb on + strand at 33.276 kb on + strand at 33.276 kb on + strand at 33.277 kb on - strand at 33.277 kb on - strand at 33.277 kb on - strand at 33.277 kb on - strand at 33.277 kb on - strand at 33.277 kb on - strand at 33.277 kb on - strand at 33.277 kb on - strand at 33.277 kb on - strand at 33.277 kb on - strand at 33.277 kb on - strand at 33.277 kb on - strand at 33.277 kb on - strand at 33.277 kb on - strand at 33.277 kb on - strand at 33.277 kb on - strand at 33.277 kb on - strand at 33.277 kb on - strand at 33.277 kb on - strand at 33.277 kb on - strand at 33.277 kb on - strand at 33.277 kb on - strand at 33.277 kb on - strand at 33.277 kb on - strand at 33.277 kb on - strand at 33.368 kb on + strand at 33.368 kb on + strand at 33.368 kb on + strand at 33.368 kb on + strand at 33.368 kb on + strand at 33.368 kb on + strand at 33.368 kb on + strand at 33.808 kb on - strand, within QEN71_RS00155 at 34.877 kb on + strand at 34.877 kb on + strand at 34.877 kb on + strand at 34.877 kb on + strand at 34.877 kb on + strand at 34.877 kb on + strand at 34.878 kb on - strand at 34.878 kb on - strand at 34.878 kb on - strand at 34.878 kb on - strand at 34.878 kb on - strand at 34.902 kb on + strand at 34.902 kb on + strand at 34.902 kb on + strand at 34.902 kb on + strand at 34.902 kb on + strand at 34.902 kb on + strand at 34.902 kb on + strand at 34.902 kb on + strand at 34.902 kb on + strand at 34.902 kb on + strand at 34.902 kb on + strand at 34.903 kb on - strand at 34.903 kb on - strand at 34.903 kb on - strand at 34.903 kb on - strand at 34.903 kb on - strand at 34.903 kb on - strand at 34.903 kb on - strand at 34.903 kb on - strand at 34.903 kb on - strand at 34.943 kb on + strand at 34.943 kb on + strand at 34.944 kb on - strand at 35.058 kb on + strand, within QEN71_RS00165 at 35.058 kb on + strand, within QEN71_RS00165 at 35.058 kb on + strand, within QEN71_RS00165 at 35.058 kb on + strand, within QEN71_RS00165 at 35.058 kb on + strand, within QEN71_RS00165 at 35.058 kb on + strand, within QEN71_RS00165 at 35.058 kb on + strand, within QEN71_RS00165 at 35.058 kb on + strand, within QEN71_RS00165 at 35.058 kb on + strand, within QEN71_RS00165 at 35.058 kb on + strand, within QEN71_RS00165 at 35.058 kb on + strand, within QEN71_RS00165 at 35.058 kb on + strand, within QEN71_RS00165 at 35.058 kb on + strand, within QEN71_RS00165 at 35.058 kb on + strand, within QEN71_RS00165 at 35.058 kb on + strand, within QEN71_RS00165 at 35.058 kb on + strand, within QEN71_RS00165 at 35.058 kb on + strand, within QEN71_RS00165 at 35.058 kb on + strand, within QEN71_RS00165 at 35.059 kb on - strand, within QEN71_RS00165 at 35.059 kb on - strand, within QEN71_RS00165 at 35.059 kb on - strand, within QEN71_RS00165 at 35.059 kb on - strand, within QEN71_RS00165 at 35.059 kb on - strand, within QEN71_RS00165 at 35.059 kb on - strand, within QEN71_RS00165 at 35.059 kb on - strand, within QEN71_RS00165 at 35.059 kb on - strand, within QEN71_RS00165 at 35.059 kb on - strand, within QEN71_RS00165 at 35.059 kb on - strand, within QEN71_RS00165 at 35.059 kb on - strand, within QEN71_RS00165 at 35.059 kb on - strand, within QEN71_RS00165 at 35.120 kb on - strand, within QEN71_RS00165 at 35.190 kb on - strand, within QEN71_RS00165 at 35.226 kb on + strand, within QEN71_RS00165 at 35.226 kb on + strand, within QEN71_RS00165 at 35.226 kb on + strand, within QEN71_RS00165 at 35.226 kb on + strand, within QEN71_RS00165 at 35.227 kb on - strand, within QEN71_RS00165 at 35.227 kb on - strand, within QEN71_RS00165 at 35.235 kb on + strand, within QEN71_RS00165 at 35.235 kb on + strand, within QEN71_RS00165 at 35.236 kb on - strand, within QEN71_RS00165 at 35.236 kb on - strand, within QEN71_RS00165 at 35.236 kb on - strand, within QEN71_RS00165 at 35.645 kb on - strand at 35.645 kb on - strand at 35.645 kb on - strand at 35.648 kb on + strand at 35.648 kb on + strand at 35.648 kb on + strand at 35.648 kb on + strand at 35.660 kb on + strand at 35.692 kb on + strand at 35.724 kb on + strand at 35.724 kb on + strand at 35.724 kb on + strand at 35.724 kb on + strand at 35.724 kb on + strand at 35.724 kb on + strand at 35.724 kb on + strand at 35.725 kb on - strand at 35.725 kb on - strand at 35.725 kb on - strand at 35.725 kb on - strand at 35.725 kb on - strand at 35.725 kb on - strand at 35.725 kb on - strand at 35.725 kb on - strand at 35.861 kb on - strand, within QEN71_RS00170
Per-strain Table
Position Strand Gene LocusTag Fraction Fumaric (C) remove 32,944 - QEN71_RS00150 0.86 +0.5 33,272 + +0.1 33,272 + -1.0 33,272 + -1.7 33,276 + -1.3 33,276 + +1.1 33,276 + -1.3 33,276 + -0.6 33,276 + +0.3 33,276 + -0.9 33,276 + +0.0 33,276 + -0.2 33,276 + -2.7 33,276 + -0.3 33,276 + +0.3 33,276 + -3.0 33,276 + +1.9 33,276 + +0.2 33,276 + -0.6 33,277 - -0.3 33,277 - +1.0 33,277 - +0.2 33,277 - +0.6 33,277 - +0.3 33,277 - -0.2 33,277 - +1.9 33,277 - +1.6 33,277 - -0.9 33,277 - +0.2 33,277 - -1.3 33,277 - -1.4 33,277 - +0.4 33,277 - -2.5 33,277 - +0.2 33,277 - +0.5 33,277 - +2.1 33,277 - -0.7 33,277 - +0.3 33,277 - +0.1 33,277 - +0.8 33,277 - -1.8 33,277 - -1.0 33,277 - +0.1 33,277 - -0.1 33,368 + +0.4 33,368 + -0.8 33,368 + -1.3 33,368 + +0.1 33,368 + -0.7 33,368 + +0.0 33,368 + -0.4 33,808 - QEN71_RS00155 0.87 -0.5 34,877 + -0.7 34,877 + -0.5 34,877 + -0.3 34,877 + -1.2 34,877 + -1.2 34,877 + +0.1 34,878 - -0.5 34,878 - +0.1 34,878 - -0.7 34,878 - -0.2 34,878 - +1.1 34,902 + +0.3 34,902 + -2.6 34,902 + +0.1 34,902 + +0.6 34,902 + -0.9 34,902 + -0.7 34,902 + -1.0 34,902 + +0.1 34,902 + -1.0 34,902 + -1.5 34,902 + -0.3 34,903 - -1.3 34,903 - +0.7 34,903 - +0.0 34,903 - -0.5 34,903 - -1.7 34,903 - +0.7 34,903 - -0.9 34,903 - +1.7 34,903 - +0.9 34,943 + +0.9 34,943 + -0.9 34,944 - -0.9 35,058 + QEN71_RS00165 0.12 +2.4 35,058 + QEN71_RS00165 0.12 +0.3 35,058 + QEN71_RS00165 0.12 -0.8 35,058 + QEN71_RS00165 0.12 +0.2 35,058 + QEN71_RS00165 0.12 +1.3 35,058 + QEN71_RS00165 0.12 -1.4 35,058 + QEN71_RS00165 0.12 -0.7 35,058 + QEN71_RS00165 0.12 +1.6 35,058 + QEN71_RS00165 0.12 -0.0 35,058 + QEN71_RS00165 0.12 -0.4 35,058 + QEN71_RS00165 0.12 -0.4 35,058 + QEN71_RS00165 0.12 -0.3 35,058 + QEN71_RS00165 0.12 -0.5 35,058 + QEN71_RS00165 0.12 -0.1 35,058 + QEN71_RS00165 0.12 +0.4 35,058 + QEN71_RS00165 0.12 +0.8 35,058 + QEN71_RS00165 0.12 -0.5 35,058 + QEN71_RS00165 0.12 +0.2 35,059 - QEN71_RS00165 0.12 +0.3 35,059 - QEN71_RS00165 0.12 -0.3 35,059 - QEN71_RS00165 0.12 +0.1 35,059 - QEN71_RS00165 0.12 +0.4 35,059 - QEN71_RS00165 0.12 +0.1 35,059 - QEN71_RS00165 0.12 -0.5 35,059 - QEN71_RS00165 0.12 +0.2 35,059 - QEN71_RS00165 0.12 -0.1 35,059 - QEN71_RS00165 0.12 +0.3 35,059 - QEN71_RS00165 0.12 +0.3 35,059 - QEN71_RS00165 0.12 +0.1 35,059 - QEN71_RS00165 0.12 -0.1 35,120 - QEN71_RS00165 0.22 +1.2 35,190 - QEN71_RS00165 0.33 -0.9 35,226 + QEN71_RS00165 0.38 -0.7 35,226 + QEN71_RS00165 0.38 +0.1 35,226 + QEN71_RS00165 0.38 -0.0 35,226 + QEN71_RS00165 0.38 +0.1 35,227 - QEN71_RS00165 0.38 +0.6 35,227 - QEN71_RS00165 0.38 +0.6 35,235 + QEN71_RS00165 0.40 +0.1 35,235 + QEN71_RS00165 0.40 -0.1 35,236 - QEN71_RS00165 0.40 +0.1 35,236 - QEN71_RS00165 0.40 +0.5 35,236 - QEN71_RS00165 0.40 -0.4 35,645 - -0.3 35,645 - -0.7 35,645 - -0.3 35,648 + +0.6 35,648 + +0.3 35,648 + +0.7 35,648 + -0.5 35,660 + -1.7 35,692 + -0.6 35,724 + +1.4 35,724 + +1.3 35,724 + +0.8 35,724 + -0.6 35,724 + -1.1 35,724 + -0.6 35,724 + -1.8 35,725 - -2.6 35,725 - -1.3 35,725 - +0.7 35,725 - -0.4 35,725 - +0.6 35,725 - -0.9 35,725 - -1.4 35,725 - +1.0 35,861 - QEN71_RS00170 0.16 -0.2
Or see this region's nucleotide sequence