Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04016

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2
4,502,187	+		MIT1002_04014	0.49	+0.3
4,502,195	-		MIT1002_04014	0.49	-0.1
4,502,211	+		MIT1002_04014	0.51	+0.1
4,502,229	-		MIT1002_04014	0.53	-0.5
4,502,348	-		MIT1002_04014	0.66	+0.4
4,502,481	+		MIT1002_04014	0.81	+0.0
4,502,520	-		MIT1002_04014	0.85	+1.5
4,502,564	+		MIT1002_04014	0.90	-0.3
4,502,572	-				-1.1
4,502,600	+				-0.0
4,502,600	+				+0.2
4,502,600	+				-0.7
4,502,608	-				-0.3
4,502,630	-				+0.0
4,502,674	-				+1.7
4,502,736	+		MIT1002_04015	0.20	-0.4
4,502,736	+		MIT1002_04015	0.20	+0.9
4,502,736	+		MIT1002_04015	0.20	+1.8
4,502,744	-		MIT1002_04015	0.22	+0.8
4,502,753	+		MIT1002_04015	0.25	+0.8
4,502,847	+		MIT1002_04015	0.55	-0.4
4,502,945	-		MIT1002_04015	0.86	+0.0
4,502,969	-				-0.7
4,502,983	-				+0.2
4,503,012	-				+0.3
4,503,162	+				+0.4
4,503,185	+				+0.5
4,503,277	+		MIT1002_04016	0.13	+0.1
4,503,285	-		MIT1002_04016	0.14	+0.2
4,503,285	-		MIT1002_04016	0.14	+1.2
4,503,311	+		MIT1002_04016	0.18	-0.6
4,503,326	+		MIT1002_04016	0.20	+0.6
4,503,334	-		MIT1002_04016	0.20	-0.4
4,503,334	-		MIT1002_04016	0.20	-1.2
4,503,334	-		MIT1002_04016	0.20	+1.0
4,503,353	+		MIT1002_04016	0.23	+0.1
4,503,353	+		MIT1002_04016	0.23	+0.4
4,503,353	+		MIT1002_04016	0.23	-0.4
4,503,361	-		MIT1002_04016	0.24	+1.2
4,503,361	-		MIT1002_04016	0.24	-0.1
4,503,582	+		MIT1002_04016	0.51	+0.1
4,503,770	-		MIT1002_04016	0.74	+2.9
4,503,777	+		MIT1002_04016	0.75	+0.9
4,503,824	+		MIT1002_04016	0.81	-0.4
4,503,862	+		MIT1002_04016	0.86	+0.6
4,503,883	+		MIT1002_04016	0.88	+0.2
4,503,888	+		MIT1002_04016	0.89	+1.0
4,503,888	+		MIT1002_04016	0.89	+0.9
4,503,896	-		MIT1002_04016	0.90	+0.4
4,503,896	-		MIT1002_04016	0.90	+0.3
4,503,923	+				+1.7
4,503,925	+				-0.5
4,503,933	-				+0.6
4,503,933	-				+0.1
4,503,933	-				+0.1
4,503,933	-				+0.1
4,503,935	+				-1.1
4,503,943	-				+2.2
4,503,985	+				-0.9
4,503,985	+				+0.3
4,503,993	-				+0.0
4,503,993	-				+0.7
4,503,993	-				+1.4
4,504,048	+				-0.3
4,504,074	-				-0.7
4,504,113	-				+0.2
4,504,219	+		MIT1002_04017	0.20	+0.3
4,504,232	-		MIT1002_04017	0.22	+0.0
4,504,249	+		MIT1002_04017	0.24	-0.3
4,504,299	-		MIT1002_04017	0.31	+0.7
4,504,374	+		MIT1002_04017	0.42	+0.2
4,504,381	+		MIT1002_04017	0.43	+0.5
4,504,471	-		MIT1002_04017	0.55	-0.3
4,504,489	-		MIT1002_04017	0.58	+0.7
4,504,507	-		MIT1002_04017	0.60	+0.2
4,504,514	-		MIT1002_04017	0.61	-0.4
4,504,607	+		MIT1002_04017	0.74	+1.8
4,504,614	+		MIT1002_04017	0.75	-0.5
4,504,614	+		MIT1002_04017	0.75	+1.2
4,504,614	+		MIT1002_04017	0.75	-0.4
4,504,614	+		MIT1002_04017	0.75	-1.2
4,504,614	+		MIT1002_04017	0.75	+1.2
4,504,622	-		MIT1002_04017	0.76	-0.4
4,504,622	-		MIT1002_04017	0.76	+0.2
4,504,666	-		MIT1002_04017	0.83	-1.7
4,504,673	-		MIT1002_04017	0.84	-0.3
4,504,698	-		MIT1002_04017	0.87	-1.0
4,504,760	+				-0.1
4,504,768	-				-1.5
4,504,778	-				-0.3
4,504,791	+				-0.3
4,504,792	-				-2.1
4,504,882	-				-2.3
4,504,887	-				-0.7
4,504,909	-				+0.0
4,504,910	+				+1.2
4,504,910	+				-0.1
4,504,910	+				-0.7
4,504,910	+				-0.4
4,504,910	+				+0.5
4,504,910	+				-0.4
4,504,910	+				-0.8
4,504,918	-				-2.1
4,504,918	-				+1.7
4,504,918	-				+2.1
4,504,918	-				+1.8
4,504,918	-				+0.1
4,504,918	-				+0.1
4,504,918	-				+0.0
4,504,918	-				-1.1
4,504,918	-				-0.7
4,504,918	-				+0.2
4,504,918	-				-0.7
4,504,923	-				-0.4