Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03973

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2
4,459,338	-		MIT1002_03972	0.65	-0.7
4,459,338	-		MIT1002_03972	0.65	+0.0
4,459,390	+		MIT1002_03972	0.68	-1.0
4,459,464	-		MIT1002_03972	0.73	+0.5
4,459,546	+		MIT1002_03972	0.78	+0.9
4,459,565	-		MIT1002_03972	0.80	+2.3
4,459,567	+		MIT1002_03972	0.80	-1.0
4,459,575	-		MIT1002_03972	0.80	+0.8
4,459,603	+		MIT1002_03972	0.82	-0.4
4,459,621	+		MIT1002_03972	0.83	-3.5
4,459,629	-		MIT1002_03972	0.84	-0.3
4,459,629	-		MIT1002_03972	0.84	-0.9
4,459,655	+		MIT1002_03972	0.85	-0.4
4,459,691	+		MIT1002_03972	0.88	-0.7
4,459,782	-				-0.5
4,459,820	+				-0.5
4,459,895	-				-1.7
4,459,953	+				-0.2
4,460,195	+				-0.8
4,460,203	-				+1.2
4,460,335	-				+0.3
4,460,343	-				+0.2
4,460,363	+				-0.1
4,460,366	+				-0.1
4,460,382	-				+0.3
4,460,504	-		MIT1002_03973	0.19	-0.1
4,460,506	+		MIT1002_03973	0.20	+0.3
4,460,506	+		MIT1002_03973	0.20	+0.2
4,460,514	-		MIT1002_03973	0.20	+1.9
4,460,514	-		MIT1002_03973	0.20	+0.5
4,460,559	-		MIT1002_03973	0.25	-0.7
4,460,567	-		MIT1002_03973	0.26	-0.6
4,460,614	+		MIT1002_03973	0.32	+0.0
4,460,638	+		MIT1002_03973	0.34	+0.1
4,460,724	-		MIT1002_03973	0.44	-0.9
4,460,799	-		MIT1002_03973	0.52	-0.7
4,460,834	-		MIT1002_03973	0.56	+0.1
4,460,851	+		MIT1002_03973	0.58	+0.2
4,460,862	+		MIT1002_03973	0.59	+0.6
4,460,866	+		MIT1002_03973	0.60	+1.0
4,460,874	-		MIT1002_03973	0.60	-0.3
4,460,874	-		MIT1002_03973	0.60	-0.5
4,460,874	-		MIT1002_03973	0.60	-0.7
4,460,885	+		MIT1002_03973	0.62	+1.9
4,460,885	+		MIT1002_03973	0.62	+0.5
4,460,885	+		MIT1002_03973	0.62	-1.6
4,460,893	-		MIT1002_03973	0.63	-0.6
4,460,995	-		MIT1002_03973	0.74	-1.7
4,461,010	+		MIT1002_03973	0.76	-0.3
4,461,102	+		MIT1002_03973	0.86	-0.3
4,461,121	+		MIT1002_03973	0.88	-0.4
4,461,121	+		MIT1002_03973	0.88	-2.2
4,461,121	+		MIT1002_03973	0.88	-0.3
4,461,129	-		MIT1002_03973	0.89	+0.6
4,461,129	-		MIT1002_03973	0.89	-0.0
4,461,129	-		MIT1002_03973	0.89	-0.1
4,461,129	-		MIT1002_03973	0.89	+0.4
4,461,129	-		MIT1002_03973	0.89	+0.7
4,461,136	-		MIT1002_03973	0.90	-0.2
4,461,150	-				+2.4
4,461,248	+				+0.6
4,461,248	+				-0.2
4,461,256	-				-0.2
4,461,256	-				-0.9
4,461,307	-		MIT1002_03974	0.13	-0.1
4,461,366	+		MIT1002_03974	0.28	+0.5
4,461,373	+		MIT1002_03974	0.30	+0.1
4,461,396	+		MIT1002_03974	0.35	-1.2
4,461,403	+		MIT1002_03974	0.37	-0.6
4,461,436	+		MIT1002_03974	0.45	-1.9
4,461,444	-		MIT1002_03974	0.47	-1.0
4,461,495	+		MIT1002_03974	0.60	-0.2
4,461,503	-		MIT1002_03974	0.62	+0.4
4,461,503	-		MIT1002_03974	0.62	-0.5
4,461,506	-		MIT1002_03974	0.62	-0.3
4,461,513	+		MIT1002_03974	0.64	-0.7
4,461,532	+		MIT1002_03974	0.69	+1.1
4,461,532	+		MIT1002_03974	0.69	-2.7
4,461,540	-		MIT1002_03974	0.71	+0.2
4,461,640	-				-0.5
4,461,640	-				-0.8
4,461,694	+				-0.2
4,461,699	+				+1.2
4,461,709	+				-3.0
4,461,775	+				-2.9
4,461,876	-				-2.0
4,462,113	+		MIT1002_03975	0.36	-1.4
4,462,120	+		MIT1002_03975	0.36	-1.6
4,462,130	+		MIT1002_03975	0.37	-0.4
4,462,130	+		MIT1002_03975	0.37	-2.0
4,462,191	-		MIT1002_03975	0.44	-1.6