Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03786

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2
4,231,367	+				-1.1
4,231,486	+				-0.7
4,231,529	-				-5.7
4,231,561	-				-3.6
4,231,574	+		MIT1002_03785	0.11	-3.2
4,231,574	+		MIT1002_03785	0.11	-2.0
4,231,574	+		MIT1002_03785	0.11	-3.3
4,231,574	+		MIT1002_03785	0.11	-2.9
4,231,574	+		MIT1002_03785	0.11	-3.3
4,231,582	-		MIT1002_03785	0.12	-3.8
4,231,582	-		MIT1002_03785	0.12	-2.8
4,231,582	-		MIT1002_03785	0.12	-3.5
4,231,582	-		MIT1002_03785	0.12	-1.3
4,231,582	-		MIT1002_03785	0.12	-3.5
4,231,705	-		MIT1002_03785	0.26	-3.4
4,231,705	-		MIT1002_03785	0.26	-2.6
4,231,746	+		MIT1002_03785	0.30	-5.1
4,231,754	-		MIT1002_03785	0.31	-2.8
4,231,764	+		MIT1002_03785	0.32	-2.9
4,231,772	-		MIT1002_03785	0.33	-3.9
4,231,890	+		MIT1002_03785	0.47	-2.6
4,231,914	+		MIT1002_03785	0.49	-1.2
4,231,922	-		MIT1002_03785	0.50	-3.6
4,232,012	-		MIT1002_03785	0.60	-4.3
4,232,036	-		MIT1002_03785	0.63	-5.2
4,232,159	+		MIT1002_03785	0.77	-4.0
4,232,167	-		MIT1002_03785	0.78	-2.5
4,232,198	+		MIT1002_03785	0.82	-3.3
4,232,207	-		MIT1002_03785	0.83	-4.3
4,232,252	-		MIT1002_03785	0.88	-2.3
4,232,252	-		MIT1002_03785	0.88	-5.3
4,232,252	-		MIT1002_03785	0.88	-2.3
4,232,253	-		MIT1002_03785	0.88	-3.9
4,232,286	-				-1.9
4,232,398	+				-5.4
4,232,398	+				-3.4
4,232,398	+				-4.5
4,232,406	-				-4.2
4,232,406	-				-0.4
4,232,498	-		MIT1002_03786	0.11	-0.0
4,232,627	+		MIT1002_03786	0.23	-3.3
4,232,627	+		MIT1002_03786	0.23	-4.1
4,232,670	-		MIT1002_03786	0.26	-3.0
4,232,670	-		MIT1002_03786	0.26	-3.2
4,232,703	-		MIT1002_03786	0.29	-5.5
4,232,707	+		MIT1002_03786	0.30	-1.6
4,232,707	+		MIT1002_03786	0.30	-2.0
4,232,715	-		MIT1002_03786	0.30	-1.9
4,232,715	-		MIT1002_03786	0.30	-2.6
4,232,715	-		MIT1002_03786	0.30	-1.6
4,232,715	-		MIT1002_03786	0.30	-5.0
4,232,780	+		MIT1002_03786	0.36	-2.3
4,232,788	-		MIT1002_03786	0.37	-2.3
4,232,788	-		MIT1002_03786	0.37	-3.6
4,233,034	+		MIT1002_03786	0.58	-2.5
4,233,042	-		MIT1002_03786	0.59	-4.8
4,233,142	+		MIT1002_03786	0.67	-0.8
4,233,157	-		MIT1002_03786	0.69	-4.8
4,233,194	-		MIT1002_03786	0.72	-3.8
4,233,239	-		MIT1002_03786	0.76	-5.2
4,233,265	+		MIT1002_03786	0.78	-3.9
4,233,278	-		MIT1002_03786	0.79	-3.0
4,233,373	-		MIT1002_03786	0.87	-3.0
4,233,374	-		MIT1002_03786	0.88	-4.2
4,233,394	-		MIT1002_03786	0.89	-4.2
4,233,510	-				-5.1
4,233,569	-				-2.8
4,233,573	+				-3.3
4,233,573	+				-3.1
4,233,591	-				+1.5
4,233,690	+				-2.3
4,233,698	-				+0.0
4,233,752	-		MIT1002_03787	0.13	+0.5
4,233,769	+		MIT1002_03787	0.14	-1.6
4,233,802	+		MIT1002_03787	0.17	+1.1
4,233,902	-		MIT1002_03787	0.25	-0.7
4,233,904	-		MIT1002_03787	0.25	-0.7
4,234,055	-		MIT1002_03787	0.36	-0.5
4,234,077	-		MIT1002_03787	0.38	-2.0
4,234,077	-		MIT1002_03787	0.38	+0.8
4,234,204	+		MIT1002_03787	0.48	-0.1
4,234,228	+		MIT1002_03787	0.50	-1.4
4,234,228	+		MIT1002_03787	0.50	+0.4
4,234,228	+		MIT1002_03787	0.50	-0.4
4,234,236	-		MIT1002_03787	0.50	-0.8
4,234,236	-		MIT1002_03787	0.50	+0.4
4,234,236	-		MIT1002_03787	0.50	-0.4
4,234,273	-		MIT1002_03787	0.53	-0.2
4,234,390	+		MIT1002_03787	0.62	-0.2
4,234,406	+		MIT1002_03787	0.64	+0.0
4,234,421	+		MIT1002_03787	0.65	+0.8
4,234,424	-		MIT1002_03787	0.65	+0.8
4,234,467	-		MIT1002_03787	0.68	+0.3
4,234,504	+		MIT1002_03787	0.71	-1.7
4,234,504	+		MIT1002_03787	0.71	-0.3
4,234,512	-		MIT1002_03787	0.72	-0.4