Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03550

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2
3,970,343	-				+0.2
3,970,351	+				-0.9
3,970,351	+				-0.3
3,970,351	+				-2.3
3,970,351	+				-2.0
3,970,351	+				-0.6
3,970,351	+				-0.8
3,970,359	-				-0.1
3,970,359	-				-1.1
3,970,359	-				+0.1
3,970,359	-				+0.3
3,970,359	-				+0.2
3,970,359	-				-0.2
3,970,359	-				-0.4
3,970,465	+		MIT1002_03549	0.15	-1.0
3,970,473	-		MIT1002_03549	0.16	+0.1
3,970,515	+		MIT1002_03549	0.21	-0.2
3,970,518	-		MIT1002_03549	0.22	+0.3
3,970,522	-		MIT1002_03549	0.22	-0.2
3,970,626	-		MIT1002_03549	0.35	+0.4
3,970,709	-		MIT1002_03549	0.45	-1.2
3,970,759	+		MIT1002_03549	0.52	-0.7
3,970,767	+		MIT1002_03549	0.53	-1.3
3,970,817	-		MIT1002_03549	0.59	-3.3
3,970,860	-		MIT1002_03549	0.64	-1.2
3,971,011	+		MIT1002_03549	0.83	-0.7
3,971,099	-				-2.5
3,971,187	+				-0.7
3,971,218	-				+0.9
3,971,230	+				+0.7
3,971,236	-				-0.1
3,971,322	+				+0.5
3,971,324	+				+0.0
3,971,324	+				-0.3
3,971,324	+				-0.1
3,971,332	-				+0.3
3,971,342	-				+0.9
3,971,361	+				-0.2
3,971,361	+				-0.1
3,971,368	-				+0.3
3,971,369	-				-0.6
3,971,459	-				+0.4
3,971,581	+		MIT1002_03550	0.18	+0.6
3,971,608	-		MIT1002_03550	0.20	+0.9
3,971,614	-		MIT1002_03550	0.21	-0.1
3,971,626	-		MIT1002_03550	0.21	+0.4
3,971,743	+		MIT1002_03550	0.30	-0.8
3,971,752	-		MIT1002_03550	0.30	-0.7
3,971,794	+		MIT1002_03550	0.33	-0.1
3,971,799	+		MIT1002_03550	0.34	-1.9
3,971,804	+		MIT1002_03550	0.34	-1.6
3,971,807	-		MIT1002_03550	0.34	-1.4
3,971,809	+		MIT1002_03550	0.34	-0.1
3,971,851	+		MIT1002_03550	0.37	-0.3
3,971,870	+		MIT1002_03550	0.39	+0.2
3,971,884	+		MIT1002_03550	0.39	+0.6
3,971,884	+		MIT1002_03550	0.39	-0.9
3,971,892	-		MIT1002_03550	0.40	+0.2
3,971,892	-		MIT1002_03550	0.40	-0.8
3,971,892	-		MIT1002_03550	0.40	-0.8
3,971,892	-		MIT1002_03550	0.40	-0.5
3,972,077	+		MIT1002_03550	0.53	-0.2
3,972,077	+		MIT1002_03550	0.53	-0.4
3,972,085	-		MIT1002_03550	0.54	+1.3
3,972,101	+		MIT1002_03550	0.55	+0.1
3,972,134	+		MIT1002_03550	0.57	-2.1
3,972,163	+		MIT1002_03550	0.59	-0.9
3,972,171	-		MIT1002_03550	0.60	+0.1
3,972,171	-		MIT1002_03550	0.60	+0.7
3,972,251	-		MIT1002_03550	0.65	+0.1
3,972,282	+		MIT1002_03550	0.67	+0.3
3,972,282	+		MIT1002_03550	0.67	+1.6
3,972,290	-		MIT1002_03550	0.68	+0.5
3,972,290	-		MIT1002_03550	0.68	-0.3
3,972,300	-		MIT1002_03550	0.69	+0.8
3,972,334	+		MIT1002_03550	0.71	-0.1
3,972,344	+		MIT1002_03550	0.72	-1.7
3,972,347	-		MIT1002_03550	0.72	+0.0
3,972,379	+		MIT1002_03550	0.74	-1.0
3,972,382	-		MIT1002_03550	0.74	+0.7
3,972,387	-		MIT1002_03550	0.75	+0.9
3,972,420	+		MIT1002_03550	0.77	+0.6
3,972,433	-		MIT1002_03550	0.78	+0.4
3,972,452	+		MIT1002_03550	0.79	-1.7
3,972,460	-		MIT1002_03550	0.80	-0.9
3,972,510	+		MIT1002_03550	0.83	+0.2
3,972,570	-		MIT1002_03550	0.87	+0.4
3,972,593	+		MIT1002_03550	0.89	-0.4
3,972,616	+				-0.1
3,972,626	+				+1.6
3,972,722	+				+0.0
3,972,764	+				-1.0
3,972,780	+				-0.0
3,972,877	-		MIT1002_03551	0.13	+0.5
3,972,878	-		MIT1002_03551	0.13	-0.4
3,972,879	-		MIT1002_03551	0.13	-3.3
3,972,928	+		MIT1002_03551	0.18	+0.4
3,972,933	+		MIT1002_03551	0.18	-0.6
3,972,933	+		MIT1002_03551	0.18	-0.1
3,972,933	+		MIT1002_03551	0.18	+1.4
3,972,936	-		MIT1002_03551	0.18	-2.7
3,972,941	-		MIT1002_03551	0.19	-0.5
3,972,941	-		MIT1002_03551	0.19	-1.7
3,972,941	-		MIT1002_03551	0.19	+1.1
3,972,946	+		MIT1002_03551	0.19	+0.3
3,972,976	+		MIT1002_03551	0.22	-1.0
3,973,017	-		MIT1002_03551	0.26	+0.2
3,973,025	-		MIT1002_03551	0.27	+0.2
3,973,080	-		MIT1002_03551	0.32	-0.1
3,973,083	+		MIT1002_03551	0.32	-1.0
3,973,083	+		MIT1002_03551	0.32	-0.6
3,973,091	-		MIT1002_03551	0.33	-0.5
3,973,091	-		MIT1002_03551	0.33	-0.4
3,973,128	-		MIT1002_03551	0.37	+0.7
3,973,194	-		MIT1002_03551	0.43	+0.3
3,973,215	+		MIT1002_03551	0.45	-1.1
3,973,231	-		MIT1002_03551	0.46	+2.1
3,973,335	-		MIT1002_03551	0.56	-1.2
3,973,335	-		MIT1002_03551	0.56	+0.9
3,973,335	-		MIT1002_03551	0.56	+0.5
3,973,342	+		MIT1002_03551	0.57	+1.9
3,973,368	-		MIT1002_03551	0.59	-0.9
3,973,398	+		MIT1002_03551	0.62	+0.6
3,973,398	+		MIT1002_03551	0.62	-0.2
3,973,411	-		MIT1002_03551	0.63	+0.0
3,973,448	-		MIT1002_03551	0.67	-0.5
3,973,630	+		MIT1002_03551	0.84	-2.1
3,973,722	+				+0.0