Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03509

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2
3,919,537	-		MIT1002_03507	0.75	+2.7
3,919,590	+		MIT1002_03507	0.78	+3.2
3,919,696	+		MIT1002_03507	0.84	+2.9
3,919,910	-				+2.8
3,919,910	-				+3.2
3,919,910	-				+4.7
3,919,946	+				+3.2
3,919,947	+				+3.2
3,919,972	+				+2.8
3,919,980	-				+2.8
3,919,998	+		MIT1002_03508	0.13	+2.0
3,920,006	-		MIT1002_03508	0.16	+2.3
3,920,062	-		MIT1002_03508	0.37	+1.9
3,920,062	-		MIT1002_03508	0.37	+1.8
3,920,157	+		MIT1002_03508	0.72	+3.0
3,920,184	-		MIT1002_03508	0.82	+3.7
3,920,190	-		MIT1002_03508	0.85	+3.5
3,920,240	-				+3.9
3,920,240	-				+3.8
3,920,250	-				+3.1
3,920,286	-				+2.4
3,920,375	-				+2.5
3,920,387	-				+3.2
3,920,416	+				+0.3
3,920,417	+				+0.6
3,920,430	-				-0.2
3,920,509	-				+3.0
3,920,517	-				+3.6
3,920,523	-				+3.3
3,920,533	-				+1.9
3,920,625	+				+3.9
3,920,625	+				+4.0
3,920,625	+				+2.7
3,920,633	-				+3.0
3,920,633	-				+3.0
3,920,633	-				+3.2
3,920,710	+				+3.1
3,920,713	-				+3.4
3,920,713	-				+2.5
3,920,713	-				+4.3
3,920,718	-				+4.2
3,920,786	+				+3.2
3,920,833	-		MIT1002_03509	0.10	+3.7
3,920,859	-		MIT1002_03509	0.11	+3.2
3,920,869	-		MIT1002_03509	0.11	+3.6
3,920,871	-		MIT1002_03509	0.11	+4.4
3,920,874	-		MIT1002_03509	0.11	+3.0
3,920,906	+		MIT1002_03509	0.12	+2.8
3,920,914	-		MIT1002_03509	0.12	+3.3
3,920,914	-		MIT1002_03509	0.12	+2.1
3,920,972	-		MIT1002_03509	0.14	+2.9
3,920,997	+		MIT1002_03509	0.15	+3.9
3,920,998	+		MIT1002_03509	0.15	+3.7
3,921,018	+		MIT1002_03509	0.15	+3.6
3,921,018	+		MIT1002_03509	0.15	+3.1
3,921,026	-		MIT1002_03509	0.16	+3.1
3,921,026	-		MIT1002_03509	0.16	+3.2
3,921,029	+		MIT1002_03509	0.16	+1.3
3,921,036	-		MIT1002_03509	0.16	+3.2
3,921,037	-		MIT1002_03509	0.16	+3.5
3,921,039	+		MIT1002_03509	0.16	+3.1
3,921,048	-		MIT1002_03509	0.16	+4.4
3,921,054	-		MIT1002_03509	0.16	+2.3
3,921,094	+		MIT1002_03509	0.18	+2.9
3,921,155	+		MIT1002_03509	0.19	+3.0
3,921,183	-		MIT1002_03509	0.20	+2.6
3,921,217	+		MIT1002_03509	0.21	+3.2
3,921,264	+		MIT1002_03509	0.23	+3.5
3,921,500	-		MIT1002_03509	0.29	+2.2
3,921,517	-		MIT1002_03509	0.30	+2.7
3,921,686	+		MIT1002_03509	0.35	+3.0
3,921,694	-		MIT1002_03509	0.35	+3.3
3,921,765	+		MIT1002_03509	0.37	+3.5
3,921,767	+		MIT1002_03509	0.37	+3.3
3,921,779	+		MIT1002_03509	0.37	+2.8
3,921,784	+		MIT1002_03509	0.38	+3.0
3,921,784	+		MIT1002_03509	0.38	+4.0
3,921,805	-		MIT1002_03509	0.38	+3.8
3,921,818	+		MIT1002_03509	0.39	+4.4
3,921,818	+		MIT1002_03509	0.39	+3.1
3,921,825	+		MIT1002_03509	0.39	+3.7
3,921,826	-		MIT1002_03509	0.39	+3.0
3,921,826	-		MIT1002_03509	0.39	+2.9
3,921,835	-		MIT1002_03509	0.39	+3.9
3,921,859	+		MIT1002_03509	0.40	+3.7
3,922,025	+		MIT1002_03509	0.45	+3.0
3,922,040	+		MIT1002_03509	0.45	+3.1
3,922,040	+		MIT1002_03509	0.45	+3.0
3,922,040	+		MIT1002_03509	0.45	+3.3
3,922,048	-		MIT1002_03509	0.45	+3.4
3,922,048	-		MIT1002_03509	0.45	+3.6
3,922,048	-		MIT1002_03509	0.45	+3.9
3,922,067	-		MIT1002_03509	0.46	+3.2
3,922,079	-		MIT1002_03509	0.46	+3.1
3,922,222	+		MIT1002_03509	0.50	+3.7
3,922,226	-		MIT1002_03509	0.50	+3.5
3,922,229	+		MIT1002_03509	0.51	+3.3
3,922,299	-		MIT1002_03509	0.53	+5.1
3,922,393	+		MIT1002_03509	0.55	+3.7
3,922,410	+		MIT1002_03509	0.56	+2.8
3,922,410	+		MIT1002_03509	0.56	+3.4
3,922,410	+		MIT1002_03509	0.56	+3.3
3,922,410	+		MIT1002_03509	0.56	+2.9
3,922,410	+		MIT1002_03509	0.56	+2.8
3,922,411	+		MIT1002_03509	0.56	+3.7
3,922,418	-		MIT1002_03509	0.56	+2.8
3,922,418	-		MIT1002_03509	0.56	+3.5
3,922,557	-		MIT1002_03509	0.60	+3.6
3,922,557	-		MIT1002_03509	0.60	+2.3
3,922,562	+		MIT1002_03509	0.60	+3.3
3,922,575	+		MIT1002_03509	0.61	+3.2
3,922,583	-		MIT1002_03509	0.61	+3.6
3,922,585	+		MIT1002_03509	0.61	+3.7
3,922,678	+		MIT1002_03509	0.64	+1.6
3,922,751	-		MIT1002_03509	0.66	+3.0
3,922,768	+		MIT1002_03509	0.66	+3.1
3,922,892	+		MIT1002_03509	0.70	+2.6
3,922,892	-		MIT1002_03509	0.70	+2.8
3,922,899	+		MIT1002_03509	0.70	+3.1
3,922,904	+		MIT1002_03509	0.70	+3.0
3,922,910	-		MIT1002_03509	0.70	+2.8
3,922,931	+		MIT1002_03509	0.71	+2.5
3,922,944	-		MIT1002_03509	0.71	+3.2
3,922,981	-		MIT1002_03509	0.72	+3.9
3,922,981	-		MIT1002_03509	0.72	+2.3
3,922,985	+		MIT1002_03509	0.73	+2.2
3,923,284	-		MIT1002_03509	0.81	+4.3
3,923,296	+		MIT1002_03509	0.82	+5.0
3,923,296	+		MIT1002_03509	0.82	+3.2
3,923,304	-		MIT1002_03509	0.82	+2.2
3,923,372	+		MIT1002_03509	0.84	+4.0
3,923,372	+		MIT1002_03509	0.84	+0.3
3,923,377	+		MIT1002_03509	0.84	+3.1
3,923,377	+		MIT1002_03509	0.84	+4.7
3,923,385	-		MIT1002_03509	0.84	+2.9
3,923,423	-		MIT1002_03509	0.85	+4.3
3,923,423	-		MIT1002_03509	0.85	+4.7
3,923,556	-		MIT1002_03509	0.89	+4.1
3,923,556	-		MIT1002_03509	0.89	+3.4
3,923,561	-		MIT1002_03509	0.89	+3.4
3,923,640	-				+2.9
3,923,660	+				+2.8
3,923,666	+				+3.5
3,923,668	+				+2.5
3,923,792	-				+2.8
3,923,798	+				+2.8
3,923,821	-				+3.0
3,923,826	-				+3.2
3,923,836	+				+3.0
3,923,864	+				+3.4
3,923,869	+				+1.7
3,923,914	-				+1.8
3,923,914	-				+1.7
3,923,962	+				-1.1
3,923,977	+				+0.6
3,923,977	+				+0.1
3,923,977	+				-0.5
3,923,985	-				-0.5
3,923,985	-				+1.9
3,923,985	-				+2.8
3,923,985	-				+1.2
3,923,985	-				+0.8
3,923,985	-				-0.6
3,923,985	-				-1.0
3,923,985	-				-1.1
3,923,999	-				-0.0
3,924,051	+		MIT1002_03510	0.17	+1.2
3,924,056	+		MIT1002_03510	0.18	-0.0
3,924,059	-		MIT1002_03510	0.19	+1.6
3,924,059	-		MIT1002_03510	0.19	-0.5
3,924,059	-		MIT1002_03510	0.19	+1.3
3,924,098	-		MIT1002_03510	0.25	-0.2
3,924,114	+		MIT1002_03510	0.27	-1.1
3,924,160	+		MIT1002_03510	0.35	-2.2
3,924,277	+		MIT1002_03510	0.54	+0.1
3,924,277	+		MIT1002_03510	0.54	+1.6
3,924,308	+		MIT1002_03510	0.58	-0.1
3,924,316	-		MIT1002_03510	0.60	-0.5
3,924,492	+		MIT1002_03510	0.88	+0.4
3,924,500	-		MIT1002_03510	0.89	+1.0
3,924,527	+				-1.2
3,924,527	+				-1.9
3,924,535	-				-1.0
3,924,535	-				-1.6
3,924,535	-				+0.4
3,924,649	-				+0.6
3,924,718	+				+0.3
3,924,885	+				+0.4
3,924,885	+				-0.4
3,924,906	+				-0.4
3,924,906	+				-0.0
3,924,906	+				+0.2
3,924,911	+				+0.3