Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03468

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2
3,876,182	-		MIT1002_03466	0.69	+0.3
3,876,207	+		MIT1002_03466	0.75	+2.0
3,876,209	+		MIT1002_03466	0.75	-0.8
3,876,280	+				-0.5
3,876,317	+				-0.2
3,876,434	+				+0.0
3,876,439	-				-0.1
3,876,442	-				-1.3
3,876,449	+				-1.5
3,876,449	+				+0.8
3,876,451	+				-0.2
3,876,451	+				-0.3
3,876,457	-				-0.2
3,876,457	-				-0.4
3,876,459	-				-0.1
3,876,459	-				+0.0
3,876,544	-		MIT1002_03467	0.18	-0.4
3,876,570	-		MIT1002_03467	0.21	-0.2
3,876,579	+		MIT1002_03467	0.23	+2.4
3,876,603	-		MIT1002_03467	0.26	-0.4
3,876,633	-		MIT1002_03467	0.30	+0.4
3,876,655	+		MIT1002_03467	0.33	-3.3
3,876,755	+		MIT1002_03467	0.47	-0.9
3,876,809	+		MIT1002_03467	0.54	+0.8
3,876,810	+		MIT1002_03467	0.54	+0.3
3,876,816	+		MIT1002_03467	0.55	-0.9
3,876,818	-		MIT1002_03467	0.55	+0.7
3,876,824	-		MIT1002_03467	0.56	-0.4
3,876,834	+		MIT1002_03467	0.57	-1.6
3,876,886	+		MIT1002_03467	0.64	+0.5
3,876,888	+		MIT1002_03467	0.65	-0.1
3,876,888	+		MIT1002_03467	0.65	-0.5
3,876,894	-		MIT1002_03467	0.66	-3.0
3,876,896	-		MIT1002_03467	0.66	+1.6
3,876,922	-		MIT1002_03467	0.69	-0.2
3,876,932	-		MIT1002_03467	0.71	-1.3
3,877,046	+		MIT1002_03467	0.86	+0.3
3,877,104	+				-3.0
3,877,104	+				-0.7
3,877,104	+				-0.9
3,877,122	-				+1.8
3,877,122	-				-0.2
3,877,258	-		MIT1002_03468	0.10	+1.7
3,877,274	-		MIT1002_03468	0.12	-1.0
3,877,300	-		MIT1002_03468	0.14	-1.0
3,877,318	-		MIT1002_03468	0.16	+0.1
3,877,348	+		MIT1002_03468	0.19	-1.3
3,877,428	+		MIT1002_03468	0.26	+1.3
3,877,436	-		MIT1002_03468	0.27	-1.3
3,877,436	-		MIT1002_03468	0.27	-2.3
3,877,436	-		MIT1002_03468	0.27	+1.3
3,877,454	+		MIT1002_03468	0.28	-1.6
3,877,462	-		MIT1002_03468	0.29	-1.2
3,877,702	+		MIT1002_03468	0.51	+0.5
3,877,862	+		MIT1002_03468	0.66	-0.6
3,877,935	-		MIT1002_03468	0.72	+0.2
3,877,962	+		MIT1002_03468	0.75	-2.7
3,878,077	-		MIT1002_03468	0.85	+0.9
3,878,084	-		MIT1002_03468	0.86	-0.5
3,878,089	+		MIT1002_03468	0.87	+1.3
3,878,161	+				-1.9
3,878,162	-				+0.2
3,878,169	-				+0.1
3,878,236	+				-0.3
3,878,252	-				-0.1
3,878,436	-				-0.6
3,878,471	+				+1.0
3,878,554	-				-0.0
3,878,606	+				+0.4
3,878,703	-		MIT1002_03469	0.24	-1.5
3,878,706	-		MIT1002_03469	0.24	+1.4
3,878,755	-		MIT1002_03469	0.31	+1.0
3,878,769	+		MIT1002_03469	0.33	+0.1
3,878,769	+		MIT1002_03469	0.33	-0.2
3,878,777	-		MIT1002_03469	0.35	+0.6
3,878,795	+		MIT1002_03469	0.37	+0.3
3,878,803	-		MIT1002_03469	0.38	+0.4
3,878,828	-		MIT1002_03469	0.42	-1.6
3,878,911	+		MIT1002_03469	0.54	-0.1
3,878,978	+		MIT1002_03469	0.64	-0.2
3,879,030	-		MIT1002_03469	0.72	+0.3
3,879,062	-		MIT1002_03469	0.77	+0.6
3,879,095	-		MIT1002_03469	0.82	-0.1
3,879,164	-				-1.4
3,879,166	-				-0.0
3,879,169	+				+1.0
3,879,202	+				-0.1
3,879,203	+				+0.8
3,879,211	-				-1.1
3,879,213	+				-0.2