Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03238

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2
3,605,679	-				+0.6
3,605,681	+				-1.7
3,605,681	+				+1.3
3,605,689	-				-0.0
3,605,697	+				-0.4
3,605,711	+				+0.9
3,605,733	-				-1.8
3,605,735	+				-0.1
3,605,775	-				+1.3
3,605,780	+				-0.6
3,605,785	+				+0.8
3,605,788	-				+0.1
3,605,793	-				+0.5
3,605,833	+				+0.3
3,605,841	-		MIT1002_03237	0.11	-0.2
3,605,877	-		MIT1002_03237	0.17	-0.3
3,606,068	+		MIT1002_03237	0.47	+0.1
3,606,068	+		MIT1002_03237	0.47	+0.6
3,606,120	-		MIT1002_03237	0.55	+0.5
3,606,223	-		MIT1002_03237	0.71	-0.1
3,606,233	+		MIT1002_03237	0.73	+0.4
3,606,238	+		MIT1002_03237	0.74	-1.0
3,606,248	+		MIT1002_03237	0.75	+0.5
3,606,249	-		MIT1002_03237	0.75	-0.0
3,606,251	+		MIT1002_03237	0.76	+1.6
3,606,251	+		MIT1002_03237	0.76	+0.5
3,606,251	+		MIT1002_03237	0.76	+0.3
3,606,251	+		MIT1002_03237	0.76	+0.4
3,606,251	+		MIT1002_03237	0.76	-0.6
3,606,256	-		MIT1002_03237	0.76	+1.1
3,606,259	-		MIT1002_03237	0.77	-0.9
3,606,259	-		MIT1002_03237	0.77	-0.1
3,606,259	-		MIT1002_03237	0.77	+0.3
3,606,259	-		MIT1002_03237	0.77	+1.2
3,606,259	-		MIT1002_03237	0.77	-1.0
3,606,261	+		MIT1002_03237	0.77	-3.0
3,606,261	+		MIT1002_03237	0.77	+1.5
3,606,261	+		MIT1002_03237	0.77	-0.1
3,606,261	+		MIT1002_03237	0.77	+0.6
3,606,261	+		MIT1002_03237	0.77	-0.1
3,606,269	-		MIT1002_03237	0.79	+0.4
3,606,269	-		MIT1002_03237	0.79	-1.6
3,606,269	-		MIT1002_03237	0.79	-1.3
3,606,269	-		MIT1002_03237	0.79	-0.1
3,606,269	-		MIT1002_03237	0.79	+0.8
3,606,269	-		MIT1002_03237	0.79	-1.1
3,606,269	-		MIT1002_03237	0.79	-0.3
3,606,281	-		MIT1002_03237	0.80	-1.3
3,606,309	+		MIT1002_03237	0.85	-0.6
3,606,324	-		MIT1002_03237	0.87	-0.5
3,606,413	-				-1.9
3,606,512	-				+1.0
3,606,526	+				+0.0
3,606,526	+				+0.3
3,606,526	+				+0.7
3,606,526	+				+1.1
3,606,526	+				+0.3
3,606,526	+				+0.9
3,606,526	+				+0.1
3,606,526	+				-0.2
3,606,526	+				+0.2
3,606,526	+				+1.8
3,606,526	+				-0.2
3,606,526	+				+0.2
3,606,526	+				-0.0
3,606,526	+				+0.4
3,606,534	-				+0.7
3,606,534	-				-0.5
3,606,534	-				+0.2
3,606,534	-				-0.1
3,606,534	-				-0.8
3,606,536	+				-0.3
3,606,536	+				-0.1
3,606,536	+				+1.1
3,606,536	+				-2.8
3,606,544	-				-0.2
3,606,544	-				+3.2
3,606,719	-		MIT1002_03238	0.42	-0.9
3,606,733	+		MIT1002_03238	0.51	+0.7
3,606,782	-		MIT1002_03238	0.85	-0.6
3,606,792	-				-0.1
3,606,877	+				-0.4
3,606,884	+				+0.6
3,606,892	+				-1.5
3,606,892	+				-0.7
3,606,900	+				+0.7
3,606,900	-				-1.3
3,606,901	+				+1.3
3,607,109	+				-0.9
3,607,117	-				-0.4
3,607,170	+				-1.7
3,607,196	+				-0.8
3,607,203	-				-0.3
3,607,215	+				+0.8
3,607,257	-				+0.8
3,607,284	-				+0.5
3,607,295	+				+0.6
3,607,303	-				+0.1
3,607,319	+				+0.4
3,607,435	-				-0.0
3,607,489	+				-1.1
3,607,610	+				+0.2
3,607,618	-				-0.1
3,607,628	+				-0.8
3,607,638	-		MIT1002_03239	0.11	-0.7
3,607,649	+		MIT1002_03239	0.16	-3.8
3,607,649	+		MIT1002_03239	0.16	-0.9
3,607,657	-		MIT1002_03239	0.20	+0.4