Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03141

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2
3,503,034	-		MIT1002_03140	0.45	-4.7
3,503,068	-		MIT1002_03140	0.47	-4.3
3,503,074	-		MIT1002_03140	0.47	-3.8
3,503,088	-		MIT1002_03140	0.48	-3.8
3,503,123	+		MIT1002_03140	0.51	-3.3
3,503,138	-		MIT1002_03140	0.52	-4.3
3,503,143	-		MIT1002_03140	0.52	-0.4
3,503,169	-		MIT1002_03140	0.54	-5.1
3,503,171	+		MIT1002_03140	0.54	-4.3
3,503,259	-		MIT1002_03140	0.60	-5.3
3,503,294	+		MIT1002_03140	0.63	-1.8
3,503,302	-		MIT1002_03140	0.63	-3.0
3,503,302	-		MIT1002_03140	0.63	-4.4
3,503,302	-		MIT1002_03140	0.63	-1.8
3,503,336	+		MIT1002_03140	0.66	-3.1
3,503,351	-		MIT1002_03140	0.67	-2.0
3,503,403	-		MIT1002_03140	0.71	-6.1
3,503,546	+		MIT1002_03140	0.81	-6.7
3,503,553	+		MIT1002_03140	0.81	-2.3
3,503,561	-		MIT1002_03140	0.82	-4.9
3,503,613	-		MIT1002_03140	0.85	-5.3
3,503,623	-		MIT1002_03140	0.86	-4.8
3,503,637	+		MIT1002_03140	0.87	-4.1
3,503,737	+				-6.8
3,503,739	+				+0.7
3,503,742	+				-3.3
3,503,756	-				-4.1
3,503,756	-				-3.6
3,503,776	+				-5.4
3,503,784	-				-4.0
3,503,805	+				+0.5
3,503,820	-				+0.1
3,503,841	-				-1.1
3,503,891	+				-2.3
3,503,925	-				+0.5
3,503,937	+				+0.4
3,503,946	-				+0.4
3,503,946	-				+0.2
3,503,984	+				-0.8
3,503,984	+				+0.6
3,503,992	-				-0.0
3,504,115	-		MIT1002_03141	0.21	+1.1
3,504,162	+		MIT1002_03141	0.32	-0.1
3,504,178	+		MIT1002_03141	0.35	+0.7
3,504,215	+		MIT1002_03141	0.43	-0.7
3,504,286	-		MIT1002_03141	0.59	-0.8
3,504,396	-		MIT1002_03141	0.84	-1.8
3,504,404	+		MIT1002_03141	0.85	-0.4
3,504,405	-		MIT1002_03141	0.86	-3.3
3,504,794	+		MIT1002_03142	0.20	+0.1
3,504,808	+		MIT1002_03142	0.22	-0.4
3,504,828	+		MIT1002_03142	0.25	-1.4
3,504,841	-		MIT1002_03142	0.28	-0.3
3,504,892	-		MIT1002_03142	0.36	+0.2
3,504,937	-		MIT1002_03142	0.44	-0.4
3,504,942	-		MIT1002_03142	0.45	-1.8
3,504,946	+		MIT1002_03142	0.45	+0.0
3,505,208	-				-0.6
3,505,240	-				+0.6
3,505,261	+				+0.7
3,505,276	-				-0.8
3,505,282	+				+0.1
3,505,282	+				+0.9