Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02990

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2
3,325,878	-				-2.6
3,326,046	-		MIT1002_02989	0.19	+0.2
3,326,050	+		MIT1002_02989	0.20	-1.7
3,326,082	-		MIT1002_02989	0.23	-1.4
3,326,122	-		MIT1002_02989	0.27	-1.1
3,326,139	-		MIT1002_02989	0.29	-2.6
3,326,180	-		MIT1002_02989	0.33	-0.2
3,326,180	-		MIT1002_02989	0.33	+0.4
3,326,182	+		MIT1002_02989	0.34	-0.3
3,326,455	+		MIT1002_02989	0.63	-0.2
3,326,530	+		MIT1002_02989	0.71	+0.6
3,326,538	-		MIT1002_02989	0.71	-3.0
3,326,613	+		MIT1002_02989	0.79	+0.0
3,326,626	-		MIT1002_02989	0.81	-0.1
3,326,682	+		MIT1002_02989	0.87	+0.7
3,326,706	-		MIT1002_02989	0.89	-1.6
3,326,791	+				+0.7
3,326,810	+				-0.2
3,326,855	+				+0.5
3,326,855	+				-0.4
3,326,923	+				+0.3
3,326,971	+				-1.9
3,326,971	+				-4.2
3,326,978	+				-2.0
3,326,986	-				+1.2
3,326,986	-				-1.6
3,327,011	-				-0.3
3,327,045	+		MIT1002_02990	0.11	-0.8
3,327,070	-		MIT1002_02990	0.12	-0.8
3,327,070	-		MIT1002_02990	0.12	-0.9
3,327,070	-		MIT1002_02990	0.12	-4.1
3,327,187	-		MIT1002_02990	0.19	-1.3
3,327,229	-		MIT1002_02990	0.22	+1.7
3,327,241	-		MIT1002_02990	0.23	-0.6
3,327,259	+		MIT1002_02990	0.24	+0.0
3,327,269	-		MIT1002_02990	0.24	+0.2
3,327,342	+		MIT1002_02990	0.29	-0.1
3,327,436	+		MIT1002_02990	0.35	+1.1
3,327,453	+		MIT1002_02990	0.36	-1.6
3,327,538	-		MIT1002_02990	0.41	-0.7
3,327,548	-		MIT1002_02990	0.41	+0.6
3,327,906	+		MIT1002_02990	0.63	+0.4
3,327,912	-		MIT1002_02990	0.64	-0.4
3,327,962	+		MIT1002_02990	0.67	-1.1
3,327,970	-		MIT1002_02990	0.67	-0.3
3,328,064	-		MIT1002_02990	0.73	+0.1
3,328,074	+		MIT1002_02990	0.74	+0.1
3,328,082	-		MIT1002_02990	0.74	+0.7
3,328,082	-		MIT1002_02990	0.74	-0.1
3,328,100	-		MIT1002_02990	0.75	-0.5
3,328,162	+		MIT1002_02990	0.79	-1.2
3,328,170	-		MIT1002_02990	0.80	-1.0
3,328,170	-		MIT1002_02990	0.80	+0.9
3,328,223	+		MIT1002_02990	0.83	+0.6
3,328,233	-		MIT1002_02990	0.83	-0.6
3,328,233	-		MIT1002_02990	0.83	+1.0
3,328,241	-		MIT1002_02990	0.84	+0.1
3,328,253	-		MIT1002_02990	0.85	+1.3
3,328,261	+		MIT1002_02990	0.85	+0.4
3,328,261	+		MIT1002_02990	0.85	-1.7
3,328,269	-		MIT1002_02990	0.86	+1.1
3,328,269	-		MIT1002_02990	0.86	-0.5
3,328,269	-		MIT1002_02990	0.86	-0.2
3,328,269	-		MIT1002_02990	0.86	-0.7
3,328,341	+				-1.2
3,328,349	-				-0.1
3,328,432	+				-0.8
3,328,444	+				+0.4
3,328,454	+				-0.5
3,328,487	-				+0.2
3,328,496	-				+0.4
3,328,581	+				-0.7
3,328,620	-				-0.3
3,328,661	+				+0.9
3,328,662	-				-2.7
3,328,725	-				-1.4
3,328,883	+		MIT1002_02991	0.28	-2.1
3,328,908	-		MIT1002_02991	0.32	-4.3
3,328,915	+		MIT1002_02991	0.32	-1.1
3,328,917	+		MIT1002_02991	0.33	-5.2
3,328,925	-		MIT1002_02991	0.34	-2.1
3,328,935	-		MIT1002_02991	0.35	-1.4
3,329,048	+		MIT1002_02991	0.50	-3.7
3,329,052	-		MIT1002_02991	0.50	-4.5
3,329,056	-		MIT1002_02991	0.51	-2.6
3,329,127	+		MIT1002_02991	0.60	-1.1
3,329,174	-		MIT1002_02991	0.66	-3.1
3,329,189	-		MIT1002_02991	0.68	-1.9
3,329,189	-		MIT1002_02991	0.68	-4.6
3,329,239	-		MIT1002_02991	0.74	-2.4
3,329,265	+		MIT1002_02991	0.78	-3.1
3,329,293	-		MIT1002_02991	0.81	-2.4
3,329,498	-				-0.4