Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02884

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2
3,200,530	-		MIT1002_02881	0.78	+0.9
3,200,776	-		MIT1002_02882	0.38	+0.5
3,200,794	+		MIT1002_02882	0.51	-0.1
3,200,857	+				-1.8
3,200,932	-				+0.8
3,201,053	+		MIT1002_02883	0.50	-0.0
3,201,060	-		MIT1002_02883	0.53	-1.0
3,201,093	+		MIT1002_02883	0.66	-0.6
3,201,093	+		MIT1002_02883	0.66	-1.8
3,201,093	+		MIT1002_02883	0.66	-1.4
3,201,093	+		MIT1002_02883	0.66	-0.6
3,201,101	-		MIT1002_02883	0.69	-2.4
3,201,111	-		MIT1002_02883	0.72	-1.8
3,201,111	-		MIT1002_02883	0.72	+0.1
3,201,194	+				+0.7
3,201,285	+				-0.1
3,201,361	-		MIT1002_02884	0.13	-2.2
3,201,401	+		MIT1002_02884	0.21	-2.6
3,201,409	-		MIT1002_02884	0.22	-2.2
3,201,459	+		MIT1002_02884	0.31	+0.1
3,201,497	-		MIT1002_02884	0.38	-0.8
3,201,505	-		MIT1002_02884	0.39	-1.2
3,201,535	-		MIT1002_02884	0.45	-0.0
3,201,665	+		MIT1002_02884	0.68	-0.3
3,201,666	-		MIT1002_02884	0.68	+0.1
3,201,673	-		MIT1002_02884	0.70	-0.5
3,201,673	-		MIT1002_02884	0.70	-0.0
3,201,874	+				-2.2
3,201,882	-				-0.1
3,201,933	+				-1.0
3,201,933	+				+1.2
3,201,933	+				+0.9
3,201,933	+				-1.4
3,201,933	+				-0.2
3,201,933	+				+0.4
3,201,941	-				-0.5
3,201,958	+				+0.1
3,201,958	+				+0.9
3,201,958	+				+1.0
3,201,965	-				-0.1
3,201,966	-				+0.2
3,201,966	-				-0.2
3,201,966	-				-0.5
3,201,966	-				+0.4
3,201,975	-				-0.6
3,201,987	-				-1.4
3,201,999	+				-1.0
3,202,034	+				-1.6
3,202,218	-				-1.2
3,202,361	+				-0.9
3,202,364	-				-0.6
3,202,401	+				+1.4
3,202,495	+		MIT1002_02885	0.11	-1.2
3,202,496	-		MIT1002_02885	0.11	-0.2
3,202,503	-		MIT1002_02885	0.11	-2.2
3,202,504	+		MIT1002_02885	0.11	-2.4
3,202,512	-		MIT1002_02885	0.12	-0.9
3,202,565	+		MIT1002_02885	0.14	-1.1
3,202,575	-		MIT1002_02885	0.14	-0.5
3,202,640	+		MIT1002_02885	0.17	-0.4
3,202,648	-		MIT1002_02885	0.18	-0.2
3,202,664	+		MIT1002_02885	0.18	-0.4
3,202,672	-		MIT1002_02885	0.19	-2.3
3,202,672	-		MIT1002_02885	0.19	-0.9
3,202,689	+		MIT1002_02885	0.19	-2.3
3,202,697	-		MIT1002_02885	0.20	-1.1