Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02223

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2
2,483,953	+		MIT1002_02222	0.60	+0.1
2,483,955	+		MIT1002_02222	0.60	+1.2
2,483,959	-		MIT1002_02222	0.60	-0.7
2,483,987	+		MIT1002_02222	0.61	+0.2
2,483,988	+		MIT1002_02222	0.61	+0.4
2,483,988	-		MIT1002_02222	0.61	-1.4
2,484,022	+		MIT1002_02222	0.62	+0.9
2,484,038	-		MIT1002_02222	0.63	+0.5
2,484,039	-		MIT1002_02222	0.63	-0.9
2,484,140	+		MIT1002_02222	0.67	-0.1
2,484,140	+		MIT1002_02222	0.67	-2.5
2,484,140	+		MIT1002_02222	0.67	-0.7
2,484,140	+		MIT1002_02222	0.67	-2.2
2,484,140	+		MIT1002_02222	0.67	-0.2
2,484,140	+		MIT1002_02222	0.67	-1.6
2,484,148	-		MIT1002_02222	0.68	+0.9
2,484,148	-		MIT1002_02222	0.68	-0.9
2,484,150	+		MIT1002_02222	0.68	+1.2
2,484,283	-		MIT1002_02222	0.73	-0.2
2,484,283	-		MIT1002_02222	0.73	+0.4
2,484,370	+		MIT1002_02222	0.77	-1.1
2,484,387	+		MIT1002_02222	0.77	-0.3
2,484,417	+		MIT1002_02222	0.78	+0.6
2,484,417	+		MIT1002_02222	0.78	+2.1
2,484,422	+		MIT1002_02222	0.79	+0.0
2,484,432	+		MIT1002_02222	0.79	-0.3
2,484,441	+		MIT1002_02222	0.79	-0.3
2,484,485	+		MIT1002_02222	0.81	-0.5
2,484,513	-		MIT1002_02222	0.82	-0.2
2,484,573	-		MIT1002_02222	0.85	+0.3
2,484,573	-		MIT1002_02222	0.85	-1.1
2,484,617	-		MIT1002_02222	0.87	-0.2
2,484,633	-		MIT1002_02222	0.87	-1.6
2,484,635	+		MIT1002_02222	0.87	-0.0
2,484,638	-		MIT1002_02222	0.87	+0.5
2,484,719	-				+0.7
2,484,783	+				-1.0
2,484,907	-				-1.0
2,485,005	+		MIT1002_02223	0.10	+0.6
2,485,051	+		MIT1002_02223	0.17	-1.4
2,485,067	+		MIT1002_02223	0.19	-0.6
2,485,107	+		MIT1002_02223	0.25	+1.6
2,485,107	+		MIT1002_02223	0.25	-1.9
2,485,107	+		MIT1002_02223	0.25	+0.1
2,485,195	+		MIT1002_02223	0.37	-1.1
2,485,195	+		MIT1002_02223	0.37	-0.8
2,485,203	-		MIT1002_02223	0.38	-0.3
2,485,357	+		MIT1002_02223	0.60	+1.5
2,485,365	-		MIT1002_02223	0.61	+2.6
2,485,382	-		MIT1002_02223	0.63	-0.3
2,485,473	-		MIT1002_02223	0.76	+0.4
2,485,532	-		MIT1002_02223	0.84	-0.3
2,485,647	-				-0.9
2,485,758	+		MIT1002_02224	0.12	+0.1
2,485,761	-		MIT1002_02224	0.13	-0.7
2,485,761	-		MIT1002_02224	0.13	-0.7
2,485,823	-		MIT1002_02224	0.22	+0.4
2,485,823	-		MIT1002_02224	0.22	+1.0
2,485,873	-		MIT1002_02224	0.30	+0.9
2,485,962	+		MIT1002_02224	0.44	+0.4
2,485,964	+		MIT1002_02224	0.45	-0.1
2,486,023	+		MIT1002_02224	0.54	+0.4
2,486,048	+		MIT1002_02224	0.58	+1.1
2,486,051	+		MIT1002_02224	0.58	-0.4
2,486,051	+		MIT1002_02224	0.58	+0.9
2,486,116	-		MIT1002_02224	0.69	+0.7
2,486,158	+		MIT1002_02224	0.75	-0.1
2,486,165	+		MIT1002_02224	0.76	+0.6
2,486,165	+		MIT1002_02224	0.76	+1.7
2,486,173	-		MIT1002_02224	0.78	+0.3
2,486,173	-		MIT1002_02224	0.78	-0.5
2,486,262	+				-0.3
2,486,270	-				+0.7
2,486,270	-				-0.5
2,486,483	-				-0.7
2,486,553	+				-0.4
2,486,585	-		MIT1002_02225	0.13	-0.4
2,486,628	-		MIT1002_02225	0.19	+0.4