Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02214

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2
2,473,034	-		MIT1002_02212	0.21	+0.1
2,473,063	+		MIT1002_02212	0.26	-0.4
2,473,153	-		MIT1002_02212	0.44	-1.5
2,473,202	+		MIT1002_02212	0.53	-0.9
2,473,202	+		MIT1002_02212	0.53	-1.0
2,473,236	+		MIT1002_02212	0.60	+0.5
2,473,236	+		MIT1002_02212	0.60	-0.6
2,473,243	+		MIT1002_02212	0.61	-1.1
2,473,268	+		MIT1002_02212	0.66	-1.7
2,473,268	+		MIT1002_02212	0.66	+0.3
2,473,312	-		MIT1002_02212	0.75	-2.0
2,473,347	+		MIT1002_02212	0.82	-0.5
2,473,437	+				-0.5
2,473,438	+				-1.2
2,473,486	-				+0.3
2,473,638	-				-0.6
2,473,711	+		MIT1002_02213	0.15	+0.4
2,473,767	-		MIT1002_02213	0.31	-0.5
2,473,883	-		MIT1002_02213	0.63	+0.3
2,473,958	-		MIT1002_02213	0.84	-0.4
2,474,092	-		MIT1002_02214	0.14	-0.9
2,474,093	-		MIT1002_02214	0.14	+0.1
2,474,170	+		MIT1002_02214	0.27	+0.7
2,474,190	+		MIT1002_02214	0.30	-2.8
2,474,192	+		MIT1002_02214	0.30	+0.4
2,474,198	-		MIT1002_02214	0.31	+0.4
2,474,200	+		MIT1002_02214	0.32	+0.1
2,474,200	+		MIT1002_02214	0.32	-2.0
2,474,208	-		MIT1002_02214	0.33	-0.8
2,474,422	+		MIT1002_02214	0.69	-0.3
2,474,430	-		MIT1002_02214	0.71	-0.1
2,474,430	-		MIT1002_02214	0.71	+0.5
2,474,438	+		MIT1002_02214	0.72	+0.7
2,474,438	+		MIT1002_02214	0.72	+1.0
2,474,438	+		MIT1002_02214	0.72	-1.8
2,474,443	+		MIT1002_02214	0.73	-1.0
2,474,446	-		MIT1002_02214	0.73	-0.7
2,474,448	+		MIT1002_02214	0.74	-0.5
2,474,449	-		MIT1002_02214	0.74	+0.3
2,474,475	+		MIT1002_02214	0.78	+0.2
2,474,483	-		MIT1002_02214	0.80	-0.7
2,474,483	-		MIT1002_02214	0.80	-1.2
2,474,483	-		MIT1002_02214	0.80	+0.3
2,474,505	+		MIT1002_02214	0.83	-2.5
2,474,508	+		MIT1002_02214	0.84	-2.4
2,474,516	-		MIT1002_02214	0.85	+0.6
2,474,542	+		MIT1002_02214	0.90	+0.5
2,474,544	+				+0.1
2,474,554	+				+1.6
2,474,554	+				+0.1
2,474,554	+				-0.6
2,474,554	+				-0.2
2,474,562	-				-2.1
2,474,562	-				+1.3
2,474,603	-				+0.5
2,474,605	-				-0.1
2,474,715	+				-0.1
2,474,715	-				-0.9
2,474,723	-		MIT1002_02215	0.10	-0.1
2,474,730	+		MIT1002_02215	0.12	+0.2
2,474,743	+		MIT1002_02215	0.15	+0.4
2,474,743	+		MIT1002_02215	0.15	+0.3
2,474,751	-		MIT1002_02215	0.17	-0.5
2,474,834	+		MIT1002_02215	0.37	-0.0
2,474,858	+		MIT1002_02215	0.42	-1.9
2,474,866	-		MIT1002_02215	0.44	-0.4
2,474,921	+		MIT1002_02215	0.57	-2.3
2,474,922	-		MIT1002_02215	0.57	+0.3
2,474,929	-		MIT1002_02215	0.59	-0.5
2,474,961	-		MIT1002_02215	0.67	+0.1
2,474,977	+		MIT1002_02215	0.70	+1.0
2,474,996	-		MIT1002_02215	0.75	-1.1
2,475,112	-				+0.4
2,475,235	+				-0.3
2,475,238	-				-0.1
2,475,351	-		MIT1002_02216	0.10	-0.4
2,475,351	-		MIT1002_02216	0.10	-1.4
2,475,364	+		MIT1002_02216	0.11	+0.3
2,475,413	+		MIT1002_02216	0.14	+0.1
2,475,413	+		MIT1002_02216	0.14	+2.4
2,475,413	+		MIT1002_02216	0.14	+0.5
2,475,427	-		MIT1002_02216	0.14	-0.1
2,475,449	+		MIT1002_02216	0.15	+0.1
2,475,545	+		MIT1002_02216	0.20	-2.3