Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02198

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2
2,458,367	+				+0.7
2,458,712	+				-0.4
2,458,720	+				-1.1
2,458,733	+				-0.0
2,458,755	+				+0.8
2,458,853	-		MIT1002_02198	0.12	+1.3
2,458,858	+		MIT1002_02198	0.13	-1.6
2,458,954	-		MIT1002_02198	0.26	+1.1
2,459,011	-		MIT1002_02198	0.33	+1.7
2,459,151	-		MIT1002_02198	0.52	+0.4
2,459,198	+		MIT1002_02198	0.59	+0.6
2,459,278	+		MIT1002_02198	0.70	+1.6
2,459,302	+		MIT1002_02198	0.73	+0.9
2,459,307	+		MIT1002_02198	0.73	-0.1
2,459,318	+		MIT1002_02198	0.75	+1.2
2,459,420	+		MIT1002_02198	0.89	-0.5
2,459,430	+				+0.4
2,459,443	-				+0.4
2,459,497	+				-1.2
2,459,505	-				+2.5
2,459,505	-				+1.1
2,459,507	+				+0.1
2,459,675	-		MIT1002_02199	0.34	-0.2
2,459,723	-		MIT1002_02199	0.54	-1.3
2,459,827	-				+0.9
2,459,884	-				-0.1
2,459,914	-				-0.5
2,459,992	-				+0.9
2,460,003	+				+1.6
2,460,003	+				+1.9
2,460,003	+				+0.6
2,460,063	+				-2.4
2,460,174	-				-0.9
2,460,209	+		MIT1002_02200	0.15	-1.0
2,460,218	-		MIT1002_02200	0.18	-0.2
2,460,223	+		MIT1002_02200	0.20	-0.3
2,460,228	+		MIT1002_02200	0.21	+0.6
2,460,228	+		MIT1002_02200	0.21	+0.3
2,460,228	+		MIT1002_02200	0.21	+0.7
2,460,229	+		MIT1002_02200	0.22	+0.3
2,460,229	+		MIT1002_02200	0.22	-0.1
2,460,229	+		MIT1002_02200	0.22	-0.7
2,460,236	-		MIT1002_02200	0.24	-1.5
2,460,236	-		MIT1002_02200	0.24	-0.1
2,460,237	-		MIT1002_02200	0.24	-2.6
2,460,237	-		MIT1002_02200	0.24	+1.7
2,460,237	-		MIT1002_02200	0.24	+0.2
2,460,377	+		MIT1002_02200	0.69	+0.1
2,460,429	+		MIT1002_02200	0.86	+0.6
2,460,475	-				+2.3
2,460,496	+				-1.2