Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01428

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2
1,571,462	-		MIT1002_01427	0.46	-2.6
1,571,481	+		MIT1002_01427	0.47	-3.3
1,571,768	+		MIT1002_01427	0.68	-1.8
1,571,823	-		MIT1002_01427	0.72	-1.6
1,571,831	+		MIT1002_01427	0.72	-2.8
1,572,280	-				-3.0
1,572,331	-		MIT1002_01428	0.11	-3.2
1,572,355	-		MIT1002_01428	0.14	-5.0
1,572,526	+		MIT1002_01428	0.30	-5.6
1,572,541	-		MIT1002_01428	0.32	-2.8
1,572,595	-		MIT1002_01428	0.37	-2.7
1,572,616	+		MIT1002_01428	0.39	-4.8
1,572,624	-		MIT1002_01428	0.40	-3.0
1,572,636	+		MIT1002_01428	0.41	-2.9
1,572,654	-		MIT1002_01428	0.43	-2.1
1,572,671	+		MIT1002_01428	0.44	-1.4
1,572,676	+		MIT1002_01428	0.45	-3.7
1,572,813	+		MIT1002_01428	0.58	-5.6
1,573,133	-		MIT1002_01428	0.89	-3.5
1,573,164	-				-2.6
1,573,250	-				-2.3
1,573,394	-		MIT1002_01429	0.24	-2.9
1,573,415	+		MIT1002_01429	0.28	-1.8
1,573,458	-		MIT1002_01429	0.35	-4.3
1,573,494	-		MIT1002_01429	0.40	-4.2
1,573,533	+		MIT1002_01429	0.46	-1.6
1,573,664	+		MIT1002_01429	0.67	-5.3
1,573,681	-		MIT1002_01429	0.70	-3.7
1,573,740	-		MIT1002_01429	0.79	-4.4
1,573,792	-		MIT1002_01429	0.87	-0.9
1,573,792	-		MIT1002_01429	0.87	-2.7
1,573,792	-		MIT1002_01429	0.87	-4.5
1,573,812	+				-3.7
1,573,937	-				-2.7
1,573,975	-				-3.3
1,574,024	+				-1.4
1,574,032	-				-4.2
1,574,075	-		MIT1002_01430	0.12	-5.4
1,574,207	+		MIT1002_01430	0.19	-2.5
1,574,238	+		MIT1002_01430	0.21	-3.5