Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01330
Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2 |
|---|---|---|---|---|---|
| remove | |||||
| 1,477,547 | + | MIT1002_01330 | 0.13 | -0.2 | |
| 1,477,683 | + | MIT1002_01330 | 0.44 | -2.1 | |
| 1,477,947 | + | -0.9 | |||
| 1,478,443 | + | +0.4 | |||
| 1,478,451 | - | -0.6 | |||
| 1,478,453 | + | -1.0 | |||
| 1,478,609 | + | MIT1002_01332 | 0.20 | +0.1 | |
| 1,478,822 | - | MIT1002_01332 | 0.54 | -1.2 | |
| 1,478,909 | - | MIT1002_01332 | 0.68 | -1.2 |
Or see this region's nucleotide sequence