Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01240

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2
1,368,107	+		MIT1002_01239	0.79	-1.1
1,368,156	-		MIT1002_01239	0.80	-1.5
1,368,156	-		MIT1002_01239	0.80	-0.6
1,368,156	-		MIT1002_01239	0.80	-1.7
1,368,174	+		MIT1002_01239	0.81	-1.4
1,368,189	+		MIT1002_01239	0.81	-0.7
1,368,317	+		MIT1002_01239	0.86	-1.8
1,368,334	+		MIT1002_01239	0.86	-0.0
1,368,339	+		MIT1002_01239	0.86	-0.1
1,368,362	+		MIT1002_01239	0.87	-1.1
1,368,415	+		MIT1002_01239	0.89	-0.9
1,368,423	-		MIT1002_01239	0.89	-1.3
1,368,425	+		MIT1002_01239	0.89	-0.3
1,368,425	+		MIT1002_01239	0.89	-0.4
1,368,433	-		MIT1002_01239	0.90	-1.2
1,368,503	+				-1.4
1,368,511	-				-2.8
1,368,513	+				-2.8
1,368,520	+				-1.7
1,368,529	+				-0.1
1,368,669	+				-0.3
1,368,669	+				-1.1
1,368,677	-				-1.1
1,368,724	+				-1.6
1,368,732	-				-1.0
1,368,739	-				-0.8
1,368,739	-				-0.6
1,368,739	-				-0.7
1,369,013	+				+1.3
1,369,018	+				+0.1
1,369,072	-		MIT1002_01240	0.35	-0.9
1,369,095	+		MIT1002_01240	0.47	-0.1
1,369,172	+		MIT1002_01240	0.87	-1.1
1,369,294	+				-0.8
1,369,299	+				+1.5
1,369,302	-				-0.3
1,369,302	-				+1.3
1,369,312	-				-0.7
1,369,312	-				-1.1
1,369,312	-				+0.5
1,369,312	-				+0.4
1,369,312	-				+1.5
1,369,324	-				-0.2
1,369,485	-				-0.7
1,369,493	+				+0.6
1,369,505	-				+0.8
1,369,595	-		MIT1002_01241	0.20	+1.4
1,369,616	-		MIT1002_01241	0.24	-0.1
1,369,678	+		MIT1002_01241	0.34	+1.1
1,369,686	-		MIT1002_01241	0.35	+1.0
1,369,686	-		MIT1002_01241	0.35	+0.5
1,369,764	-		MIT1002_01241	0.48	-3.5
1,369,821	+		MIT1002_01241	0.57	+0.9
1,369,879	+		MIT1002_01241	0.67	+0.1
1,369,887	-		MIT1002_01241	0.68	+1.0
1,369,907	-		MIT1002_01241	0.72	+0.3
1,369,943	-		MIT1002_01241	0.78	+0.2
1,370,014	-		MIT1002_01241	0.89	+0.9
1,370,038	-				+0.3
1,370,048	+				-0.5