Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01179

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2
1,292,534	+		MIT1002_01177	0.63	-0.4
1,292,594	+		MIT1002_01177	0.71	+1.1
1,292,604	+		MIT1002_01177	0.72	-0.8
1,292,625	+		MIT1002_01177	0.75	-0.5
1,292,626	-		MIT1002_01177	0.75	+0.0
1,292,646	+		MIT1002_01177	0.78	+1.0
1,292,674	-		MIT1002_01177	0.82	+0.4
1,292,721	+		MIT1002_01177	0.88	+0.8
1,292,777	+				+0.4
1,292,789	-				-0.5
1,292,842	+				+0.0
1,292,843	-				-0.7
1,292,855	+				-0.5
1,292,863	-				-0.5
1,292,870	+		MIT1002_01178	0.11	+1.9
1,292,915	-		MIT1002_01178	0.20	-0.4
1,293,030	+		MIT1002_01178	0.43	-0.8
1,293,056	+		MIT1002_01178	0.49	-1.5
1,293,064	-		MIT1002_01178	0.50	-0.3
1,293,065	-		MIT1002_01178	0.50	+1.0
1,293,065	-		MIT1002_01178	0.50	+1.3
1,293,124	+		MIT1002_01178	0.62	-1.1
1,293,124	+		MIT1002_01178	0.62	-1.2
1,293,124	+		MIT1002_01178	0.62	-0.8
1,293,290	-				+0.3
1,293,292	+				-0.5
1,293,299	+				+0.4
1,293,449	+				+0.5
1,293,457	-				-2.3
1,293,587	+				-1.4
1,293,595	-				-0.7
1,293,615	-		MIT1002_01179	0.11	-1.2
1,293,690	+		MIT1002_01179	0.19	-2.5
1,293,848	+		MIT1002_01179	0.36	-0.1
1,293,855	+		MIT1002_01179	0.36	+1.1
1,293,863	-		MIT1002_01179	0.37	-0.3
1,293,884	+		MIT1002_01179	0.39	+1.8
1,293,893	-		MIT1002_01179	0.40	+0.3
1,293,980	-		MIT1002_01179	0.50	-0.5
1,293,985	-		MIT1002_01179	0.50	-1.7
1,294,017	-		MIT1002_01179	0.54	+1.5
1,294,018	-		MIT1002_01179	0.54	+0.5
1,294,189	+		MIT1002_01179	0.72	-0.5
1,294,294	+		MIT1002_01179	0.84	+1.5
1,294,313	+		MIT1002_01179	0.86	+0.7
1,294,426	+				-2.1
1,294,461	-				+0.8
1,294,552	+		MIT1002_01180	0.11	+0.5
1,294,552	+		MIT1002_01180	0.11	+0.3
1,294,594	+		MIT1002_01180	0.16	+0.1
1,294,643	+		MIT1002_01180	0.21	-0.9
1,294,643	+		MIT1002_01180	0.21	-3.5
1,294,643	+		MIT1002_01180	0.21	-1.4
1,294,651	-		MIT1002_01180	0.22	-0.2
1,294,651	-		MIT1002_01180	0.22	+0.0
1,294,666	+		MIT1002_01180	0.24	-0.5
1,294,749	-		MIT1002_01180	0.33	-0.5
1,294,867	-		MIT1002_01180	0.46	-0.3
1,294,872	+		MIT1002_01180	0.47	+0.2
1,294,893	-		MIT1002_01180	0.49	-0.5
1,294,893	-		MIT1002_01180	0.49	-0.5
1,294,893	-		MIT1002_01180	0.49	+1.3
1,294,942	+		MIT1002_01180	0.54	+1.5
1,295,170	+		MIT1002_01180	0.80	+0.8
1,295,201	+		MIT1002_01180	0.83	-1.1
1,295,206	+		MIT1002_01180	0.84	-0.5
1,295,206	+		MIT1002_01180	0.84	-0.6
1,295,218	+		MIT1002_01180	0.85	-1.4
1,295,263	-				-1.0
1,295,439	-				-1.0