Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01146

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2
1,256,727	+				+0.6
1,256,744	-				-1.8
1,256,744	-				+0.0
1,256,830	+		MIT1002_01144	0.15	-0.2
1,256,862	-		MIT1002_01144	0.28	-1.8
1,256,869	+		MIT1002_01144	0.31	+1.4
1,256,882	-		MIT1002_01144	0.37	+0.5
1,256,920	-		MIT1002_01144	0.53	+1.8
1,256,922	+		MIT1002_01144	0.53	+1.7
1,256,981	-		MIT1002_01144	0.78	+0.0
1,256,992	+		MIT1002_01144	0.82	+0.1
1,257,000	-		MIT1002_01144	0.86	-0.2
1,257,018	+				-0.4
1,257,018	-				+0.7
1,257,158	-		MIT1002_01145	0.29	+0.2
1,257,178	+		MIT1002_01145	0.33	-0.1
1,257,198	+		MIT1002_01145	0.38	+0.1
1,257,267	+		MIT1002_01145	0.53	-0.7
1,257,307	-		MIT1002_01145	0.62	-0.9
1,257,424	+		MIT1002_01145	0.88	-1.8
1,257,491	-				+0.1
1,257,511	-				-2.2
1,257,598	+				-0.4
1,257,604	+				-0.1
1,257,604	+				-0.1
1,257,604	+				-0.1
1,257,612	-				+0.0
1,257,762	+		MIT1002_01146	0.10	-0.5
1,257,828	+		MIT1002_01146	0.18	-1.2
1,257,828	+		MIT1002_01146	0.18	+2.6
1,257,828	+		MIT1002_01146	0.18	-0.8
1,257,917	+		MIT1002_01146	0.30	+0.8
1,257,923	-		MIT1002_01146	0.30	-1.3
1,257,923	-		MIT1002_01146	0.30	-0.3
1,258,197	-		MIT1002_01146	0.65	-1.4
1,258,228	+		MIT1002_01146	0.68	+2.3
1,258,228	+		MIT1002_01146	0.68	-0.6
1,258,228	+		MIT1002_01146	0.68	-0.0
1,258,277	+		MIT1002_01146	0.75	-0.9
1,258,277	+		MIT1002_01146	0.75	-0.1
1,258,277	+		MIT1002_01146	0.75	+0.9
1,258,285	-		MIT1002_01146	0.76	+0.7
1,258,340	-		MIT1002_01146	0.82	-0.4
1,258,509	-				+0.7
1,258,583	+				-1.6
1,259,086	+		MIT1002_01147	0.25	-0.7
1,259,095	-		MIT1002_01147	0.26	+1.3
1,259,158	-		MIT1002_01147	0.30	+2.8
1,259,160	+		MIT1002_01147	0.30	-1.8
1,259,181	+		MIT1002_01147	0.31	+0.1
1,259,189	-		MIT1002_01147	0.32	+0.7
1,259,189	-		MIT1002_01147	0.32	+0.0
1,259,191	-		MIT1002_01147	0.32	-0.2
1,259,201	-		MIT1002_01147	0.32	+1.0
1,259,220	+		MIT1002_01147	0.34	-2.3
1,259,233	-		MIT1002_01147	0.34	+0.4
1,259,250	+		MIT1002_01147	0.36	+0.2
1,259,260	+		MIT1002_01147	0.36	-2.1
1,259,284	-		MIT1002_01147	0.38	-0.6
1,259,353	-		MIT1002_01147	0.42	-1.8
1,259,363	-		MIT1002_01147	0.43	+0.6