Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00007

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 2
10,139	-				+2.3
10,139	-				+0.6
10,311	+		MIT1002_00008	0.18	-0.8
10,312	+		MIT1002_00008	0.18	-0.8
10,348	-		MIT1002_00008	0.24	+0.6
10,365	+		MIT1002_00008	0.27	-0.9
10,373	-		MIT1002_00008	0.28	+0.0
10,373	-		MIT1002_00008	0.28	+0.1
10,413	+		MIT1002_00008	0.34	-0.3
10,424	+		MIT1002_00008	0.36	+0.0
10,424	+		MIT1002_00008	0.36	+1.1
10,424	+		MIT1002_00008	0.36	-0.5
10,469	-		MIT1002_00008	0.44	+0.4
10,469	-		MIT1002_00008	0.44	-0.3
10,618	-		MIT1002_00008	0.68	-0.7
10,618	-		MIT1002_00008	0.68	-0.1
10,626	+		MIT1002_00008	0.69	+0.5
10,635	-		MIT1002_00008	0.71	-0.0
10,645	+		MIT1002_00008	0.73	-1.6
10,658	+		MIT1002_00008	0.75	-0.7
10,666	-		MIT1002_00008	0.76	-0.7
10,666	-		MIT1002_00008	0.76	+2.2
10,678	-		MIT1002_00008	0.78	-0.6
10,736	+		MIT1002_00008	0.88	+1.2
10,737	+		MIT1002_00008	0.88	-0.3
10,745	-		MIT1002_00008	0.89	-0.9
10,757	+				-0.1
10,782	+				+2.3
10,847	+				+0.4
10,857	+				-0.4
10,973	-		MIT1002_00009	0.11	+0.9
10,983	-		MIT1002_00009	0.13	+0.6
10,991	-		MIT1002_00009	0.15	-1.1
11,053	+		MIT1002_00009	0.28	-0.2