Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS16815

Experiment: biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
3,695,544	+		LRK53_RS16800	0.78	+1.5
3,695,773	+				+0.4
3,695,773	+				-2.2
3,695,773	+				-1.3
3,695,774	-				+0.1
3,695,774	-				-1.0
3,695,777	+				-1.4
3,695,777	+				+2.2
3,695,777	+				-1.3
3,695,777	+				-2.0
3,695,777	+				-1.9
3,695,778	-				-0.7
3,695,778	-				-0.5
3,695,778	-				-2.3
3,695,778	-				-1.1
3,695,778	-				-0.9
3,695,778	-				-1.0
3,695,784	+				+1.4
3,695,784	+				+0.7
3,695,784	+				-0.8
3,695,784	+				-1.3
3,695,785	-				-2.5
3,695,785	-				+0.7
3,695,832	+				-1.4
3,695,833	-				-0.2
3,695,880	+				-0.1
3,695,880	+				+1.0
3,695,880	+				-1.0
3,695,881	-				-0.9
3,695,881	-				-1.0
3,695,881	-				-1.0
3,695,881	-				-0.1
3,695,881	-				-0.6
3,695,881	-				-0.6
3,695,881	-				+0.8
3,695,881	-				-1.9
3,695,881	-				-1.2
3,695,976	+		LRK53_RS16805	0.21	-2.0
3,695,977	-		LRK53_RS16805	0.21	-1.1
3,696,062	+		LRK53_RS16805	0.39	-2.5
3,696,062	+		LRK53_RS16805	0.39	-3.2
3,696,062	+		LRK53_RS16805	0.39	-0.1
3,696,062	+		LRK53_RS16805	0.39	-1.0
3,696,062	+		LRK53_RS16805	0.39	-0.3
3,696,062	+		LRK53_RS16805	0.39	-0.5
3,696,062	+		LRK53_RS16805	0.39	-1.1
3,696,062	+		LRK53_RS16805	0.39	-0.9
3,696,063	-		LRK53_RS16805	0.40	-0.5
3,696,063	-		LRK53_RS16805	0.40	-0.7
3,696,063	-		LRK53_RS16805	0.40	+0.4
3,696,169	+		LRK53_RS16805	0.63	+1.3
3,696,169	+		LRK53_RS16805	0.63	-2.7
3,696,169	+		LRK53_RS16805	0.63	+0.7
3,696,169	+		LRK53_RS16805	0.63	-0.4
3,696,169	+		LRK53_RS16805	0.63	-1.1
3,696,170	-		LRK53_RS16805	0.63	-2.2
3,696,170	-		LRK53_RS16805	0.63	-0.1
3,696,170	-		LRK53_RS16805	0.63	-0.3
3,696,170	-		LRK53_RS16805	0.63	-0.8
3,696,231	+		LRK53_RS16805	0.76	+1.3
3,696,231	+		LRK53_RS16805	0.76	-3.1
3,696,231	+		LRK53_RS16805	0.76	-1.4
3,696,231	+		LRK53_RS16805	0.76	-0.1
3,696,231	+		LRK53_RS16805	0.76	-0.4
3,696,231	+		LRK53_RS16805	0.76	-2.2
3,696,231	+		LRK53_RS16805	0.76	+0.0
3,696,231	+		LRK53_RS16805	0.76	-0.8
3,696,231	+		LRK53_RS16805	0.76	-1.1
3,696,231	+		LRK53_RS16805	0.76	+0.4
3,696,231	+		LRK53_RS16805	0.76	-2.8
3,696,231	+		LRK53_RS16805	0.76	-2.5
3,696,231	+		LRK53_RS16805	0.76	-2.0
3,696,231	+		LRK53_RS16805	0.76	+0.3
3,696,231	+		LRK53_RS16805	0.76	+1.9
3,696,231	+		LRK53_RS16805	0.76	-1.2
3,696,231	+		LRK53_RS16805	0.76	+0.9
3,696,231	+		LRK53_RS16805	0.76	-0.6
3,696,231	+		LRK53_RS16805	0.76	-1.0
3,696,231	+		LRK53_RS16805	0.76	+0.1
3,696,231	+		LRK53_RS16805	0.76	-2.0
3,696,231	+		LRK53_RS16805	0.76	-0.7
3,696,231	+		LRK53_RS16805	0.76	-0.7
3,696,232	-		LRK53_RS16805	0.76	-1.3
3,696,232	-		LRK53_RS16805	0.76	-2.2
3,696,232	-		LRK53_RS16805	0.76	+0.6
3,696,232	-		LRK53_RS16805	0.76	-0.9
3,696,232	-		LRK53_RS16805	0.76	-0.2
3,696,232	-		LRK53_RS16805	0.76	-2.4
3,696,232	-		LRK53_RS16805	0.76	-0.8
3,696,232	-		LRK53_RS16805	0.76	+1.9
3,696,232	-		LRK53_RS16805	0.76	-1.7
3,696,232	-		LRK53_RS16805	0.76	-0.5
3,696,232	-		LRK53_RS16805	0.76	-0.7
3,696,232	-		LRK53_RS16805	0.76	-0.8
3,696,232	-		LRK53_RS16805	0.76	-1.8
3,696,232	-		LRK53_RS16805	0.76	+0.3
3,696,232	-		LRK53_RS16805	0.76	+0.1
3,696,232	-		LRK53_RS16805	0.76	-1.4
3,696,232	-		LRK53_RS16805	0.76	-0.3
3,696,232	-		LRK53_RS16805	0.76	-1.4
3,696,232	-		LRK53_RS16805	0.76	+0.1
3,696,232	-		LRK53_RS16805	0.76	+0.1
3,696,232	-		LRK53_RS16805	0.76	-1.5
3,696,232	-		LRK53_RS16805	0.76	+1.0
3,696,232	-		LRK53_RS16805	0.76	-1.4
3,696,232	-		LRK53_RS16805	0.76	+0.3
3,696,232	-		LRK53_RS16805	0.76	+0.3
3,696,232	-		LRK53_RS16805	0.76	-0.9
3,696,232	-		LRK53_RS16805	0.76	+0.6
3,696,232	-		LRK53_RS16805	0.76	-2.0
3,696,232	-		LRK53_RS16805	0.76	-0.8
3,696,232	-		LRK53_RS16805	0.76	-0.9
3,696,232	-		LRK53_RS16805	0.76	-0.1
3,696,232	-		LRK53_RS16805	0.76	-0.3
3,696,232	-		LRK53_RS16805	0.76	-1.3
3,696,232	-		LRK53_RS16805	0.76	+1.0
3,696,232	-		LRK53_RS16805	0.76	+0.4
3,696,232	-		LRK53_RS16805	0.76	-0.4
3,696,232	-		LRK53_RS16805	0.76	+0.2
3,696,232	-		LRK53_RS16805	0.76	-0.9
3,696,232	-		LRK53_RS16805	0.76	-0.9
3,696,232	-		LRK53_RS16805	0.76	-0.4
3,696,232	-		LRK53_RS16805	0.76	-2.4
3,696,232	-		LRK53_RS16805	0.76	-1.1
3,696,235	+		LRK53_RS16805	0.77	+0.1
3,696,235	+		LRK53_RS16805	0.77	-1.3
3,696,235	+		LRK53_RS16805	0.77	-0.1
3,696,235	+		LRK53_RS16805	0.77	-1.3
3,696,235	+		LRK53_RS16805	0.77	-1.3
3,696,236	-		LRK53_RS16805	0.77	+0.6
3,696,236	-		LRK53_RS16805	0.77	+0.8
3,696,236	-		LRK53_RS16805	0.77	-1.0
3,696,236	-		LRK53_RS16805	0.77	-0.0
3,696,236	-		LRK53_RS16805	0.77	-2.2
3,696,236	-		LRK53_RS16805	0.77	-0.8
3,696,236	-		LRK53_RS16805	0.77	-2.2
3,696,335	-				-2.5
3,696,335	-				-1.0
3,696,335	-				-1.3
3,696,335	-				+2.0
3,696,335	-				-1.3
3,696,382	+		LRK53_RS16810	0.20	-2.2
3,696,382	+		LRK53_RS16810	0.20	+0.1
3,696,383	-		LRK53_RS16810	0.21	-0.6
3,696,383	-		LRK53_RS16810	0.21	-0.3
3,696,410	+		LRK53_RS16810	0.34	-0.7
3,696,410	+		LRK53_RS16810	0.34	+1.3
3,696,410	+		LRK53_RS16810	0.34	+0.1
3,696,410	+		LRK53_RS16810	0.34	-0.4
3,696,410	+		LRK53_RS16810	0.34	+0.1
3,696,410	+		LRK53_RS16810	0.34	-0.8
3,696,410	+		LRK53_RS16810	0.34	+0.6
3,696,410	+		LRK53_RS16810	0.34	-1.0
3,696,410	+		LRK53_RS16810	0.34	-0.3
3,696,410	+		LRK53_RS16810	0.34	-1.3
3,696,410	+		LRK53_RS16810	0.34	-0.7
3,696,410	+		LRK53_RS16810	0.34	-0.1
3,696,410	+		LRK53_RS16810	0.34	+1.4
3,696,411	-		LRK53_RS16810	0.35	-1.2
3,696,411	-		LRK53_RS16810	0.35	-3.8
3,696,411	-		LRK53_RS16810	0.35	+1.9
3,696,411	-		LRK53_RS16810	0.35	-0.9
3,696,411	-		LRK53_RS16810	0.35	-0.5
3,696,411	-		LRK53_RS16810	0.35	+1.3
3,696,411	-		LRK53_RS16810	0.35	-0.4
3,696,411	-		LRK53_RS16810	0.35	-2.2
3,696,411	-		LRK53_RS16810	0.35	-0.0
3,696,411	-		LRK53_RS16810	0.35	+0.7
3,696,411	-		LRK53_RS16810	0.35	-0.7
3,696,411	-		LRK53_RS16810	0.35	-1.6
3,696,411	-		LRK53_RS16810	0.35	-1.4
3,696,411	-		LRK53_RS16810	0.35	-0.8
3,696,411	-		LRK53_RS16810	0.35	-0.3
3,696,411	-		LRK53_RS16810	0.35	-0.5
3,696,411	-		LRK53_RS16810	0.35	+0.2
3,696,411	-		LRK53_RS16810	0.35	-1.3
3,696,411	-		LRK53_RS16810	0.35	+0.7
3,696,411	-		LRK53_RS16810	0.35	-0.7
3,696,411	-		LRK53_RS16810	0.35	-0.3
3,696,411	-		LRK53_RS16810	0.35	-0.9
3,696,411	-		LRK53_RS16810	0.35	-2.7
3,696,411	-		LRK53_RS16810	0.35	+0.7
3,696,411	-		LRK53_RS16810	0.35	-0.4
3,696,411	-		LRK53_RS16810	0.35	+0.8
3,696,433	+		LRK53_RS16810	0.46	-3.8
3,696,433	+		LRK53_RS16810	0.46	-0.8
3,696,433	+		LRK53_RS16810	0.46	-1.7
3,696,433	+		LRK53_RS16810	0.46	+0.8
3,696,434	-		LRK53_RS16810	0.47	+1.3
3,696,458	+		LRK53_RS16810	0.59	-1.1
3,696,458	+		LRK53_RS16810	0.59	-1.9
3,696,459	-		LRK53_RS16810	0.59	+0.1
3,696,573	+				-1.6
3,696,573	+				-2.5
3,696,574	-				-0.3
3,696,574	-				-2.3
3,696,574	-				-0.6
3,696,574	-				+1.3
3,696,625	+		LRK53_RS16815	0.23	-0.6
3,696,625	+		LRK53_RS16815	0.23	+0.1
3,696,625	+		LRK53_RS16815	0.23	+2.0
3,696,625	+		LRK53_RS16815	0.23	-0.5
3,696,625	+		LRK53_RS16815	0.23	-1.7
3,696,625	+		LRK53_RS16815	0.23	+0.1
3,696,625	+		LRK53_RS16815	0.23	-1.2
3,696,625	+		LRK53_RS16815	0.23	-0.7
3,696,625	+		LRK53_RS16815	0.23	-0.1
3,696,625	+		LRK53_RS16815	0.23	-0.8
3,696,625	+		LRK53_RS16815	0.23	-1.0
3,696,625	+		LRK53_RS16815	0.23	-0.8
3,696,625	+		LRK53_RS16815	0.23	-0.8
3,696,625	+		LRK53_RS16815	0.23	+2.2
3,696,625	+		LRK53_RS16815	0.23	+1.1
3,696,625	+		LRK53_RS16815	0.23	+1.5
3,696,625	+		LRK53_RS16815	0.23	-1.6
3,696,625	+		LRK53_RS16815	0.23	-0.5
3,696,626	-		LRK53_RS16815	0.24	+0.6
3,696,626	-		LRK53_RS16815	0.24	-0.4
3,696,626	-		LRK53_RS16815	0.24	-2.2
3,696,626	-		LRK53_RS16815	0.24	-2.3
3,696,626	-		LRK53_RS16815	0.24	-2.4
3,696,626	-		LRK53_RS16815	0.24	+0.2
3,696,626	-		LRK53_RS16815	0.24	+0.1
3,696,626	-		LRK53_RS16815	0.24	+0.6
3,696,626	-		LRK53_RS16815	0.24	-1.0
3,696,626	-		LRK53_RS16815	0.24	-0.8
3,696,626	-		LRK53_RS16815	0.24	+0.5
3,696,626	-		LRK53_RS16815	0.24	+0.1
3,696,669	+		LRK53_RS16815	0.35	-0.1
3,696,669	+		LRK53_RS16815	0.35	-2.3
3,696,669	+		LRK53_RS16815	0.35	+2.2
3,696,670	-		LRK53_RS16815	0.35	-1.2
3,696,670	-		LRK53_RS16815	0.35	-0.3
3,696,670	-		LRK53_RS16815	0.35	-0.7
3,696,670	-		LRK53_RS16815	0.35	-2.8
3,696,670	-		LRK53_RS16815	0.35	-1.7
3,696,670	-		LRK53_RS16815	0.35	+1.5
3,696,670	-		LRK53_RS16815	0.35	-1.0
3,696,670	-		LRK53_RS16815	0.35	-0.7
3,696,670	-		LRK53_RS16815	0.35	-1.3
3,696,670	-		LRK53_RS16815	0.35	-0.7
3,696,676	+		LRK53_RS16815	0.37	-1.5
3,696,676	+		LRK53_RS16815	0.37	-2.7
3,696,676	+		LRK53_RS16815	0.37	+0.7
3,696,676	+		LRK53_RS16815	0.37	+0.3
3,696,676	+		LRK53_RS16815	0.37	-0.8
3,696,677	-		LRK53_RS16815	0.37	-1.2
3,696,677	-		LRK53_RS16815	0.37	-2.0
3,696,677	-		LRK53_RS16815	0.37	+2.2
3,696,677	-		LRK53_RS16815	0.37	-0.5
3,696,677	-		LRK53_RS16815	0.37	+0.3
3,696,677	-		LRK53_RS16815	0.37	-0.1
3,696,677	-		LRK53_RS16815	0.37	-0.6
3,696,779	+		LRK53_RS16815	0.65	-1.1
3,696,779	+		LRK53_RS16815	0.65	+2.1
3,696,780	-		LRK53_RS16815	0.65	-0.1
3,696,849	+		LRK53_RS16815	0.83	-0.1
3,696,849	+		LRK53_RS16815	0.83	+0.3
3,696,849	+		LRK53_RS16815	0.83	-1.3
3,696,849	+		LRK53_RS16815	0.83	-0.1
3,696,849	+		LRK53_RS16815	0.83	-1.5
3,696,849	+		LRK53_RS16815	0.83	-1.5
3,696,849	+		LRK53_RS16815	0.83	-0.4
3,696,849	+		LRK53_RS16815	0.83	-2.1
3,696,849	+		LRK53_RS16815	0.83	-3.2
3,696,849	+		LRK53_RS16815	0.83	+0.5
3,696,850	-		LRK53_RS16815	0.83	-0.5
3,696,850	-		LRK53_RS16815	0.83	+0.9
3,696,850	-		LRK53_RS16815	0.83	-2.0
3,696,850	-		LRK53_RS16815	0.83	-0.4
3,696,850	-		LRK53_RS16815	0.83	-1.5
3,696,850	-		LRK53_RS16815	0.83	-1.1
3,696,850	-		LRK53_RS16815	0.83	+0.5
3,696,850	-		LRK53_RS16815	0.83	-0.3
3,696,850	-		LRK53_RS16815	0.83	+0.1
3,696,850	-		LRK53_RS16815	0.83	-0.2
3,696,904	+				-2.4
3,696,904	+				-0.4
3,696,904	+				-1.3
3,696,904	+				-0.8
3,696,905	-				-2.5
3,696,905	-				-0.5
3,696,912	+				+1.1
3,696,912	+				-0.3
3,696,912	+				+0.9
3,696,912	+				-1.5
3,696,912	+				-0.3
3,696,912	+				-0.5
3,696,912	+				-1.2
3,696,912	+				+0.0
3,696,912	+				-0.4
3,696,912	+				-1.3
3,696,912	+				+0.7
3,696,912	+				-1.2
3,696,912	+				-0.8
3,696,912	+				-1.4
3,696,912	+				-0.1
3,696,912	+				-0.9
3,696,912	+				-0.8
3,696,912	+				-1.3
3,696,912	+				+0.8
3,696,912	+				-0.2
3,696,912	+				-0.5
3,696,912	+				-0.1
3,696,912	+				-1.4
3,696,912	+				-1.0
3,696,912	+				+1.7
3,696,912	+				-2.2
3,696,913	-				+0.9
3,696,913	-				-0.3
3,696,913	-				-0.2
3,696,913	-				-0.8
3,696,913	-				-2.4
3,696,913	-				-0.9
3,696,913	-				-2.5
3,696,913	-				-1.9
3,696,913	-				-0.1
3,696,913	-				-0.7
3,696,969	+				-1.9
3,696,969	+				-0.5
3,696,969	+				-1.0
3,696,969	+				-2.2
3,696,969	+				+0.1
3,696,969	+				+0.5
3,696,969	+				-1.4
3,696,969	+				-0.3
3,696,970	-				+0.9
3,696,970	-				-0.8
3,696,970	-				+2.9
3,696,970	-				-0.4
3,696,970	-				+0.6
3,696,970	-				-0.4
3,696,970	-				-2.0
3,696,970	-				-2.2
3,696,970	-				+2.3
3,696,970	-				-0.4
3,697,006	-				-2.8
3,697,050	+				+0.7
3,697,051	-				+0.0
3,697,059	+		LRK53_RS16820	0.10	-2.4
3,697,059	+		LRK53_RS16820	0.10	-0.1
3,697,059	+		LRK53_RS16820	0.10	-0.9
3,697,059	+		LRK53_RS16820	0.10	-1.2
3,697,060	-		LRK53_RS16820	0.10	-0.8
3,697,060	-		LRK53_RS16820	0.10	-0.2
3,697,060	-		LRK53_RS16820	0.10	+1.7
3,697,293	+		LRK53_RS16820	0.30	-2.1
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3,697,294	-		LRK53_RS16820	0.30	-0.5
3,697,425	+		LRK53_RS16820	0.42	+1.7
3,697,452	+		LRK53_RS16820	0.44	-0.9
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3,697,452	+		LRK53_RS16820	0.44	-1.3
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3,697,452	+		LRK53_RS16820	0.44	-2.7
3,697,452	+		LRK53_RS16820	0.44	-0.2
3,697,452	+		LRK53_RS16820	0.44	+0.0
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