Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15415

Experiment: biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
3,367,756	+		LRK53_RS15410	0.16	-0.3
3,367,757	-		LRK53_RS15410	0.16	-1.7
3,367,757	-		LRK53_RS15410	0.16	-0.7
3,367,831	+		LRK53_RS15410	0.24	+1.1
3,367,831	+		LRK53_RS15410	0.24	-1.4
3,367,831	+		LRK53_RS15410	0.24	-0.5
3,367,831	+		LRK53_RS15410	0.24	-0.8
3,367,831	+		LRK53_RS15410	0.24	-0.7
3,367,832	-		LRK53_RS15410	0.24	-1.4
3,367,832	-		LRK53_RS15410	0.24	-2.4
3,367,832	-		LRK53_RS15410	0.24	-2.1
3,367,832	-		LRK53_RS15410	0.24	-0.8
3,367,832	-		LRK53_RS15410	0.24	-0.1
3,367,894	+		LRK53_RS15410	0.31	-1.3
3,367,895	-		LRK53_RS15410	0.31	-0.6
3,367,895	-		LRK53_RS15410	0.31	-1.9
3,367,895	-		LRK53_RS15410	0.31	-1.4
3,367,912	+		LRK53_RS15410	0.33	-0.9
3,367,912	+		LRK53_RS15410	0.33	+0.4
3,367,995	-		LRK53_RS15410	0.42	-0.1
3,368,029	+		LRK53_RS15410	0.46	-1.1
3,368,029	+		LRK53_RS15410	0.46	-0.2
3,368,029	+		LRK53_RS15410	0.46	+0.3
3,368,029	+		LRK53_RS15410	0.46	+0.3
3,368,029	+		LRK53_RS15410	0.46	+0.3
3,368,029	+		LRK53_RS15410	0.46	-0.1
3,368,029	+		LRK53_RS15410	0.46	-1.1
3,368,029	+		LRK53_RS15410	0.46	-0.1
3,368,029	+		LRK53_RS15410	0.46	-1.2
3,368,029	+		LRK53_RS15410	0.46	-2.8
3,368,029	+		LRK53_RS15410	0.46	-0.7
3,368,029	+		LRK53_RS15410	0.46	-0.0
3,368,029	+		LRK53_RS15410	0.46	-2.0
3,368,029	+		LRK53_RS15410	0.46	-2.5
3,368,029	+		LRK53_RS15410	0.46	+0.4
3,368,030	-		LRK53_RS15410	0.46	-0.3
3,368,030	-		LRK53_RS15410	0.46	-0.4
3,368,030	-		LRK53_RS15410	0.46	-1.1
3,368,030	-		LRK53_RS15410	0.46	-0.4
3,368,030	-		LRK53_RS15410	0.46	-1.9
3,368,030	-		LRK53_RS15410	0.46	+1.1
3,368,030	-		LRK53_RS15410	0.46	-0.7
3,368,065	+		LRK53_RS15410	0.50	-1.1
3,368,066	-		LRK53_RS15410	0.50	-2.1
3,368,125	+		LRK53_RS15410	0.56	+0.3
3,368,125	+		LRK53_RS15410	0.56	+0.1
3,368,125	+		LRK53_RS15410	0.56	-1.1
3,368,125	+		LRK53_RS15410	0.56	-1.4
3,368,126	-		LRK53_RS15410	0.56	+1.3
3,368,126	-		LRK53_RS15410	0.56	-1.1
3,368,126	-		LRK53_RS15410	0.56	-0.2
3,368,126	-		LRK53_RS15410	0.56	-1.0
3,368,146	+		LRK53_RS15410	0.59	-0.2
3,368,146	+		LRK53_RS15410	0.59	-1.6
3,368,146	+		LRK53_RS15410	0.59	-1.0
3,368,146	+		LRK53_RS15410	0.59	-0.8
3,368,146	+		LRK53_RS15410	0.59	+0.1
3,368,146	+		LRK53_RS15410	0.59	+0.3
3,368,146	+		LRK53_RS15410	0.59	-0.1
3,368,147	-		LRK53_RS15410	0.59	-1.2
3,368,147	-		LRK53_RS15410	0.59	+0.3
3,368,147	-		LRK53_RS15410	0.59	-1.9
3,368,147	-		LRK53_RS15410	0.59	-0.1
3,368,147	-		LRK53_RS15410	0.59	-0.6
3,368,147	-		LRK53_RS15410	0.59	-0.3
3,368,458	+				-0.3
3,368,458	+				-2.0
3,368,458	+				+0.6
3,368,458	+				+0.0
3,368,458	+				-0.5
3,368,458	+				-1.8
3,368,458	+				+0.3
3,368,458	+				-0.5
3,368,459	-				+1.3
3,368,459	-				-1.9
3,368,459	-				-0.8
3,368,459	-				-1.1
3,368,459	-				-1.4
3,368,687	+		LRK53_RS15415	0.16	+0.1
3,368,687	+		LRK53_RS15415	0.16	-1.4
3,368,687	+		LRK53_RS15415	0.16	-1.4
3,368,687	+		LRK53_RS15415	0.16	-0.0
3,368,687	+		LRK53_RS15415	0.16	-1.9
3,368,687	+		LRK53_RS15415	0.16	+1.1
3,368,688	-		LRK53_RS15415	0.16	-0.2
3,368,688	-		LRK53_RS15415	0.16	-0.9
3,368,688	-		LRK53_RS15415	0.16	-1.0
3,368,688	-		LRK53_RS15415	0.16	+0.3
3,368,688	-		LRK53_RS15415	0.16	-0.6
3,368,688	-		LRK53_RS15415	0.16	-1.7
3,368,688	-		LRK53_RS15415	0.16	-1.9
3,368,688	-		LRK53_RS15415	0.16	-1.9
3,368,847	+		LRK53_RS15415	0.31	+0.3
3,368,913	+		LRK53_RS15415	0.37	-0.9
3,368,913	+		LRK53_RS15415	0.37	-0.9
3,368,913	+		LRK53_RS15415	0.37	-0.4
3,368,913	+		LRK53_RS15415	0.37	-1.1
3,368,914	-		LRK53_RS15415	0.37	+1.1
3,368,988	+		LRK53_RS15415	0.44	-0.6
3,368,988	+		LRK53_RS15415	0.44	-1.8
3,368,988	+		LRK53_RS15415	0.44	-2.1
3,368,988	+		LRK53_RS15415	0.44	-2.8
3,368,989	-		LRK53_RS15415	0.44	+0.8
3,368,989	-		LRK53_RS15415	0.44	-1.7
3,368,989	-		LRK53_RS15415	0.44	-2.2
3,369,110	+		LRK53_RS15415	0.55	-0.4
3,369,110	+		LRK53_RS15415	0.55	-2.0
3,369,110	+		LRK53_RS15415	0.55	-2.6
3,369,110	+		LRK53_RS15415	0.55	-1.1
3,369,110	+		LRK53_RS15415	0.55	-1.8
3,369,110	+		LRK53_RS15415	0.55	+0.2
3,369,110	+		LRK53_RS15415	0.55	-0.3
3,369,110	+		LRK53_RS15415	0.55	-0.4
3,369,111	-		LRK53_RS15415	0.55	-1.3
3,369,111	-		LRK53_RS15415	0.55	-2.0
3,369,111	-		LRK53_RS15415	0.55	-0.2
3,369,111	-		LRK53_RS15415	0.55	-3.4
3,369,111	-		LRK53_RS15415	0.55	-1.6
3,369,111	-		LRK53_RS15415	0.55	-0.1
3,369,111	-		LRK53_RS15415	0.55	-1.1
3,369,111	-		LRK53_RS15415	0.55	-2.9
3,369,477	+		LRK53_RS15415	0.90	-1.7
3,369,477	+		LRK53_RS15415	0.90	+1.1
3,369,478	-		LRK53_RS15415	0.90	+0.6
3,369,486	+				-1.7
3,369,486	+				-1.3
3,369,486	+				-1.6
3,369,486	+				-0.4
3,369,486	+				-1.0
3,369,486	+				-2.7
3,369,487	-				-0.0
3,369,487	-				+0.7
3,369,571	-				-0.7
3,369,582	+				+0.1
3,369,582	+				-1.1
3,369,582	+				-0.3
3,369,582	+				+0.4
3,369,582	+				-0.8
3,369,582	+				+0.2
3,369,582	+				-0.3
3,369,582	+				-0.4
3,369,582	+				+1.0
3,369,582	+				+0.4
3,369,582	+				-0.9
3,369,582	+				-0.2
3,369,582	+				+0.1
3,369,582	+				-1.3
3,369,582	+				-0.8
3,369,582	+				-1.6
3,369,582	+				-0.7
3,369,582	+				-1.3
3,369,583	-				-3.8
3,369,583	-				-0.8
3,369,583	-				-2.6
3,369,583	-				-0.5
3,369,583	-				-0.7
3,369,583	-				-1.2
3,369,583	-				-0.8
3,369,583	-				-1.6
3,369,583	-				-0.3
3,369,583	-				+0.4
3,369,583	-				+1.5
3,369,583	-				-0.1
3,369,583	-				-0.2
3,369,583	-				-0.4
3,369,583	-				+0.6
3,369,583	-				-0.8
3,369,583	-				-0.8
3,369,583	-				-1.2
3,369,583	-				+0.4
3,369,679	+				+0.6
3,369,680	-				-0.3
3,369,680	-				+0.1
3,369,754	+		LRK53_RS15420	0.10	-1.2
3,369,754	+		LRK53_RS15420	0.10	-0.7
3,369,754	+		LRK53_RS15420	0.10	-2.6
3,369,754	+		LRK53_RS15420	0.10	-1.3
3,369,754	+		LRK53_RS15420	0.10	+0.1
3,369,754	+		LRK53_RS15420	0.10	-2.9
3,369,755	-		LRK53_RS15420	0.10	-0.6
3,369,755	-		LRK53_RS15420	0.10	+1.1
3,369,755	-		LRK53_RS15420	0.10	+2.0
3,369,755	-		LRK53_RS15420	0.10	-0.9
3,369,755	-		LRK53_RS15420	0.10	+2.2
3,369,755	-		LRK53_RS15420	0.10	+0.6
3,369,755	-		LRK53_RS15420	0.10	-2.2
3,369,796	+		LRK53_RS15420	0.13	-1.0
3,369,796	+		LRK53_RS15420	0.13	+0.9
3,369,796	+		LRK53_RS15420	0.13	+2.3
3,369,796	+		LRK53_RS15420	0.13	-0.9
3,369,796	+		LRK53_RS15420	0.13	-1.5
3,369,796	+		LRK53_RS15420	0.13	-0.7
3,369,796	+		LRK53_RS15420	0.13	-2.3
3,369,796	+		LRK53_RS15420	0.13	-0.1
3,369,796	+		LRK53_RS15420	0.13	-1.2
3,369,796	+		LRK53_RS15420	0.13	-1.1
3,369,796	+		LRK53_RS15420	0.13	-0.9
3,369,796	+		LRK53_RS15420	0.13	-0.7
3,369,796	+		LRK53_RS15420	0.13	-1.4
3,369,796	+		LRK53_RS15420	0.13	+1.4
3,369,796	+		LRK53_RS15420	0.13	-2.9
3,369,796	+		LRK53_RS15420	0.13	-1.6
3,369,796	+		LRK53_RS15420	0.13	-0.6
3,369,796	+		LRK53_RS15420	0.13	-0.3
3,369,796	+		LRK53_RS15420	0.13	-0.8
3,369,796	+		LRK53_RS15420	0.13	-0.3
3,369,796	+		LRK53_RS15420	0.13	+0.6
3,369,796	+		LRK53_RS15420	0.13	-0.2
3,369,796	+		LRK53_RS15420	0.13	-0.8
3,369,796	+		LRK53_RS15420	0.13	+0.8
3,369,796	+		LRK53_RS15420	0.13	-0.2
3,369,796	+		LRK53_RS15420	0.13	-0.1
3,369,796	+		LRK53_RS15420	0.13	-2.4
3,369,796	+		LRK53_RS15420	0.13	+0.3
3,369,796	+		LRK53_RS15420	0.13	-1.8
3,369,796	+		LRK53_RS15420	0.13	-0.1
3,369,796	+		LRK53_RS15420	0.13	-1.1
3,369,796	+		LRK53_RS15420	0.13	-0.4
3,369,796	+		LRK53_RS15420	0.13	+0.3
3,369,796	+		LRK53_RS15420	0.13	-0.7
3,369,796	+		LRK53_RS15420	0.13	-0.4
3,369,796	+		LRK53_RS15420	0.13	-0.1
3,369,796	+		LRK53_RS15420	0.13	+0.5
3,369,796	+		LRK53_RS15420	0.13	-0.0
3,369,796	+		LRK53_RS15420	0.13	-1.0
3,369,796	+		LRK53_RS15420	0.13	-1.7
3,369,796	+		LRK53_RS15420	0.13	+2.2
3,369,796	+		LRK53_RS15420	0.13	-2.2
3,369,796	+		LRK53_RS15420	0.13	+0.1
3,369,797	-		LRK53_RS15420	0.13	-1.6
3,369,797	-		LRK53_RS15420	0.13	-0.6
3,369,797	-		LRK53_RS15420	0.13	+1.3
3,369,797	-		LRK53_RS15420	0.13	+0.1
3,369,797	-		LRK53_RS15420	0.13	-1.6
3,369,797	-		LRK53_RS15420	0.13	-2.6
3,369,797	-		LRK53_RS15420	0.13	-0.6
3,369,797	-		LRK53_RS15420	0.13	-0.9
3,369,797	-		LRK53_RS15420	0.13	-2.8
3,369,797	-		LRK53_RS15420	0.13	+0.7
3,369,797	-		LRK53_RS15420	0.13	-2.5
3,369,797	-		LRK53_RS15420	0.13	+1.0
3,369,797	-		LRK53_RS15420	0.13	-0.1
3,369,797	-		LRK53_RS15420	0.13	-0.4
3,369,797	-		LRK53_RS15420	0.13	-0.5
3,369,797	-		LRK53_RS15420	0.13	+0.4
3,369,797	-		LRK53_RS15420	0.13	-1.2
3,369,797	-		LRK53_RS15420	0.13	-0.5
3,369,797	-		LRK53_RS15420	0.13	-1.8
3,369,797	-		LRK53_RS15420	0.13	+0.2
3,369,797	-		LRK53_RS15420	0.13	-1.4
3,369,797	-		LRK53_RS15420	0.13	+0.2
3,369,797	-		LRK53_RS15420	0.13	-1.2
3,369,797	-		LRK53_RS15420	0.13	-2.5
3,369,797	-		LRK53_RS15420	0.13	+0.7
3,369,797	-		LRK53_RS15420	0.13	-1.3
3,369,797	-		LRK53_RS15420	0.13	-1.7
3,369,797	-		LRK53_RS15420	0.13	-0.9
3,369,797	-		LRK53_RS15420	0.13	-1.1
3,369,797	-		LRK53_RS15420	0.13	+0.1
3,369,797	-		LRK53_RS15420	0.13	-1.3
3,369,797	-		LRK53_RS15420	0.13	-1.7
3,369,797	-		LRK53_RS15420	0.13	-2.1
3,369,797	-		LRK53_RS15420	0.13	-1.0
3,369,797	-		LRK53_RS15420	0.13	-1.9
3,369,797	-		LRK53_RS15420	0.13	-1.4
3,369,797	-		LRK53_RS15420	0.13	-2.3
3,369,797	-		LRK53_RS15420	0.13	-0.4
3,369,797	-		LRK53_RS15420	0.13	-0.9
3,369,889	+		LRK53_RS15420	0.19	+1.7
3,369,890	-		LRK53_RS15420	0.19	-0.9
3,369,890	-		LRK53_RS15420	0.19	-0.4
3,369,907	+		LRK53_RS15420	0.20	-0.3
3,369,907	+		LRK53_RS15420	0.20	+0.3
3,369,908	-		LRK53_RS15420	0.20	+1.6
3,369,908	-		LRK53_RS15420	0.20	-0.9
3,369,908	-		LRK53_RS15420	0.20	-1.4
3,369,908	-		LRK53_RS15420	0.20	+0.1
3,369,908	-		LRK53_RS15420	0.20	-1.4
3,369,908	-		LRK53_RS15420	0.20	+0.2
3,369,908	-		LRK53_RS15420	0.20	-1.7
3,369,943	+		LRK53_RS15420	0.23	-0.4
3,369,976	+		LRK53_RS15420	0.25	-0.2
3,369,976	+		LRK53_RS15420	0.25	-0.1
3,369,976	+		LRK53_RS15420	0.25	+0.4
3,369,977	-		LRK53_RS15420	0.25	-1.7
3,369,977	-		LRK53_RS15420	0.25	+0.2
3,369,977	-		LRK53_RS15420	0.25	+0.3
3,370,084	+		LRK53_RS15420	0.32	+2.1
3,370,084	+		LRK53_RS15420	0.32	-0.1
3,370,084	+		LRK53_RS15420	0.32	+0.3
3,370,084	+		LRK53_RS15420	0.32	+0.6
3,370,085	-		LRK53_RS15420	0.32	+0.6
3,370,085	-		LRK53_RS15420	0.32	-1.0
3,370,085	-		LRK53_RS15420	0.32	-1.0
3,370,085	-		LRK53_RS15420	0.32	-0.4
3,370,085	-		LRK53_RS15420	0.32	+0.1
3,370,085	-		LRK53_RS15420	0.32	-0.9
3,370,135	+		LRK53_RS15420	0.35	-0.1
3,370,135	+		LRK53_RS15420	0.35	+0.4
3,370,135	+		LRK53_RS15420	0.35	+0.3
3,370,136	-		LRK53_RS15420	0.35	-1.4
3,370,136	-		LRK53_RS15420	0.35	-0.7
3,370,136	-		LRK53_RS15420	0.35	+0.5
3,370,136	-		LRK53_RS15420	0.35	-1.2
3,370,147	+		LRK53_RS15420	0.36	+0.6
3,370,147	+		LRK53_RS15420	0.36	-0.4
3,370,147	+		LRK53_RS15420	0.36	+0.5
3,370,148	-		LRK53_RS15420	0.36	-0.7
3,370,148	-		LRK53_RS15420	0.36	-0.6
3,370,148	-		LRK53_RS15420	0.36	-1.4
3,370,148	-		LRK53_RS15420	0.36	-0.1
3,370,148	-		LRK53_RS15420	0.36	-0.4
3,370,148	-		LRK53_RS15420	0.36	-1.1
3,370,148	-		LRK53_RS15420	0.36	+0.8
3,370,148	-		LRK53_RS15420	0.36	+2.9
3,370,148	-		LRK53_RS15420	0.36	-0.6
3,370,148	-		LRK53_RS15420	0.36	+0.1
3,370,187	+		LRK53_RS15420	0.39	+0.1
3,370,187	+		LRK53_RS15420	0.39	-0.6
3,370,188	-		LRK53_RS15420	0.39	+1.9
3,370,188	-		LRK53_RS15420	0.39	+1.1
3,370,188	-		LRK53_RS15420	0.39	-1.2
3,370,381	+		LRK53_RS15420	0.51	-1.4
3,370,381	+		LRK53_RS15420	0.51	-0.4
3,370,381	+		LRK53_RS15420	0.51	-1.6
3,370,381	+		LRK53_RS15420	0.51	-2.1
3,370,381	+		LRK53_RS15420	0.51	-0.7
3,370,381	+		LRK53_RS15420	0.51	-0.6
3,370,381	+		LRK53_RS15420	0.51	-0.9
3,370,382	-		LRK53_RS15420	0.51	-0.4
3,370,382	-		LRK53_RS15420	0.51	-1.4
3,370,382	-		LRK53_RS15420	0.51	+1.1
3,370,382	-		LRK53_RS15420	0.51	-1.1
3,370,382	-		LRK53_RS15420	0.51	+0.6
3,370,382	-		LRK53_RS15420	0.51	-0.3
3,370,382	-		LRK53_RS15420	0.51	+0.2
3,370,382	-		LRK53_RS15420	0.51	-2.5
3,370,382	-		LRK53_RS15420	0.51	+2.0
3,370,419	+		LRK53_RS15420	0.54	+0.6
3,370,419	+		LRK53_RS15420	0.54	+1.9
3,370,507	+		LRK53_RS15420	0.59	-1.1
3,370,507	+		LRK53_RS15420	0.59	-0.3
3,370,507	+		LRK53_RS15420	0.59	-2.0
3,370,507	+		LRK53_RS15420	0.59	-1.3
3,370,507	+		LRK53_RS15420	0.59	-2.0
3,370,508	-		LRK53_RS15420	0.59	-1.9
3,370,508	-		LRK53_RS15420	0.59	+0.8
3,370,508	-		LRK53_RS15420	0.59	+0.7
3,370,508	-		LRK53_RS15420	0.59	-2.4
3,370,523	-		LRK53_RS15420	0.60	-1.9
3,370,528	+		LRK53_RS15420	0.61	-0.2
3,370,529	-		LRK53_RS15420	0.61	-0.3