Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS14575

Experiment: biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
3,190,999	+				-0.4
3,190,999	+				-0.5
3,191,000	-				-1.3
3,191,000	-				-0.6
3,191,001	+				+0.2
3,191,001	+				-1.9
3,191,001	+				-0.2
3,191,001	+				-0.6
3,191,001	+				-0.6
3,191,001	+				+0.8
3,191,002	-				+0.0
3,191,002	-				-0.9
3,191,024	+				-1.8
3,191,176	-		LRK53_RS14570	0.18	-0.2
3,191,263	+		LRK53_RS14570	0.28	+0.3
3,191,263	+		LRK53_RS14570	0.28	-0.4
3,191,263	+		LRK53_RS14570	0.28	-0.9
3,191,263	+		LRK53_RS14570	0.28	-0.6
3,191,263	+		LRK53_RS14570	0.28	-1.3
3,191,263	+		LRK53_RS14570	0.28	-1.0
3,191,263	+		LRK53_RS14570	0.28	-1.9
3,191,263	+		LRK53_RS14570	0.28	+0.0
3,191,263	+		LRK53_RS14570	0.28	-2.0
3,191,263	+		LRK53_RS14570	0.28	-3.6
3,191,263	+		LRK53_RS14570	0.28	-2.4
3,191,263	+		LRK53_RS14570	0.28	-1.8
3,191,263	+		LRK53_RS14570	0.28	-0.4
3,191,263	+		LRK53_RS14570	0.28	-0.4
3,191,263	+		LRK53_RS14570	0.28	-1.2
3,191,263	+		LRK53_RS14570	0.28	-0.2
3,191,263	+		LRK53_RS14570	0.28	-2.5
3,191,264	-		LRK53_RS14570	0.28	+2.2
3,191,264	-		LRK53_RS14570	0.28	-1.7
3,191,264	-		LRK53_RS14570	0.28	-0.4
3,191,264	-		LRK53_RS14570	0.28	-0.2
3,191,264	-		LRK53_RS14570	0.28	-0.2
3,191,264	-		LRK53_RS14570	0.28	-0.3
3,191,264	-		LRK53_RS14570	0.28	-0.6
3,191,264	-		LRK53_RS14570	0.28	-0.2
3,191,264	-		LRK53_RS14570	0.28	-1.6
3,191,264	-		LRK53_RS14570	0.28	-1.0
3,191,292	+		LRK53_RS14570	0.32	-0.9
3,191,293	-		LRK53_RS14570	0.32	-0.9
3,191,293	-		LRK53_RS14570	0.32	-0.3
3,191,293	-		LRK53_RS14570	0.32	+0.0
3,191,320	+		LRK53_RS14570	0.35	-0.5
3,191,320	+		LRK53_RS14570	0.35	-1.0
3,191,320	+		LRK53_RS14570	0.35	-1.1
3,191,320	+		LRK53_RS14570	0.35	-0.4
3,191,320	+		LRK53_RS14570	0.35	-0.2
3,191,320	+		LRK53_RS14570	0.35	+0.0
3,191,321	-		LRK53_RS14570	0.35	-0.4
3,191,321	-		LRK53_RS14570	0.35	+0.3
3,191,321	-		LRK53_RS14570	0.35	-0.5
3,191,321	-		LRK53_RS14570	0.35	-1.7
3,191,425	+		LRK53_RS14570	0.47	-0.3
3,191,425	+		LRK53_RS14570	0.47	+1.5
3,191,425	+		LRK53_RS14570	0.47	-2.3
3,191,425	+		LRK53_RS14570	0.47	+0.7
3,191,425	+		LRK53_RS14570	0.47	-2.1
3,191,425	+		LRK53_RS14570	0.47	-0.1
3,191,425	+		LRK53_RS14570	0.47	-0.8
3,191,426	-		LRK53_RS14570	0.47	+0.9
3,191,426	-		LRK53_RS14570	0.47	-0.7
3,191,426	-		LRK53_RS14570	0.47	-0.7
3,191,426	-		LRK53_RS14570	0.47	-0.0
3,191,426	-		LRK53_RS14570	0.47	-1.3
3,191,431	+		LRK53_RS14570	0.48	+2.0
3,191,431	+		LRK53_RS14570	0.48	-0.5
3,191,431	+		LRK53_RS14570	0.48	-0.5
3,191,432	-		LRK53_RS14570	0.48	+0.9
3,191,551	+		LRK53_RS14570	0.62	-0.7
3,191,551	+		LRK53_RS14570	0.62	-1.1
3,191,552	-		LRK53_RS14570	0.62	-0.4
3,191,830	+				-0.9
3,191,830	+				-1.2
3,191,830	+				-2.4
3,191,830	+				-1.5
3,191,830	+				-0.5
3,191,830	+				+0.6
3,191,830	+				-0.3
3,191,830	+				-1.4
3,191,830	+				-2.0
3,191,830	+				+0.8
3,191,830	+				-1.0
3,191,830	+				-0.9
3,191,831	-				-2.5
3,191,831	-				-0.8
3,191,831	-				-0.5
3,191,831	-				+0.2
3,191,831	-				-1.0
3,191,831	-				-0.6
3,191,831	-				-0.4
3,191,831	-				+0.2
3,191,831	-				-3.4
3,191,831	-				-1.8
3,191,876	-				-3.3
3,191,876	-				-1.7
3,192,094	+		LRK53_RS14575	0.27	-1.6
3,192,094	+		LRK53_RS14575	0.27	-1.2
3,192,094	+		LRK53_RS14575	0.27	-1.6
3,192,094	+		LRK53_RS14575	0.27	-0.6
3,192,094	+		LRK53_RS14575	0.27	-2.4
3,192,094	+		LRK53_RS14575	0.27	-0.9
3,192,094	+		LRK53_RS14575	0.27	-0.5
3,192,094	+		LRK53_RS14575	0.27	-0.8
3,192,095	-		LRK53_RS14575	0.27	-1.4
3,192,095	-		LRK53_RS14575	0.27	-1.0
3,192,095	-		LRK53_RS14575	0.27	-2.7
3,192,095	-		LRK53_RS14575	0.27	-0.2
3,192,095	-		LRK53_RS14575	0.27	+0.7
3,192,095	-		LRK53_RS14575	0.27	-0.5
3,192,095	-		LRK53_RS14575	0.27	-0.2
3,192,095	-		LRK53_RS14575	0.27	-0.3
3,192,205	+		LRK53_RS14575	0.44	+0.0
3,192,205	+		LRK53_RS14575	0.44	-1.6
3,192,206	-		LRK53_RS14575	0.44	-0.9
3,192,206	-		LRK53_RS14575	0.44	+0.6
3,192,206	-		LRK53_RS14575	0.44	-2.0
3,192,378	+		LRK53_RS14575	0.69	-0.4
3,192,378	+		LRK53_RS14575	0.69	+0.8
3,192,379	-		LRK53_RS14575	0.70	-0.5
3,192,379	-		LRK53_RS14575	0.70	+0.5
3,192,450	-		LRK53_RS14575	0.80	-1.2
3,192,457	+		LRK53_RS14575	0.81	+0.0
3,192,457	+		LRK53_RS14575	0.81	-0.7
3,192,457	+		LRK53_RS14575	0.81	+1.1
3,192,457	+		LRK53_RS14575	0.81	-0.4
3,192,457	+		LRK53_RS14575	0.81	-2.3
3,192,457	+		LRK53_RS14575	0.81	-0.6
3,192,457	+		LRK53_RS14575	0.81	-1.6
3,192,457	+		LRK53_RS14575	0.81	-1.3
3,192,458	-		LRK53_RS14575	0.81	-0.1
3,192,458	-		LRK53_RS14575	0.81	-1.6
3,192,458	-		LRK53_RS14575	0.81	+2.0
3,192,458	-		LRK53_RS14575	0.81	-1.0
3,192,458	-		LRK53_RS14575	0.81	-0.4
3,192,481	+		LRK53_RS14575	0.85	+0.3
3,192,481	+		LRK53_RS14575	0.85	+0.2
3,192,481	+		LRK53_RS14575	0.85	-1.1
3,192,482	-		LRK53_RS14575	0.85	-1.8
3,192,482	-		LRK53_RS14575	0.85	-1.6
3,192,482	-		LRK53_RS14575	0.85	-1.3
3,192,482	-		LRK53_RS14575	0.85	-0.4
3,192,482	-		LRK53_RS14575	0.85	-1.0
3,192,482	-		LRK53_RS14575	0.85	-1.2
3,192,482	-		LRK53_RS14575	0.85	-1.1
3,192,482	-		LRK53_RS14575	0.85	-1.5
3,193,104	+		LRK53_RS14580	0.49	-1.9
3,193,104	+		LRK53_RS14580	0.49	-0.9
3,193,104	+		LRK53_RS14580	0.49	-2.3
3,193,146	+		LRK53_RS14580	0.53	-0.2
3,193,146	+		LRK53_RS14580	0.53	-1.6
3,193,146	+		LRK53_RS14580	0.53	+3.1
3,193,146	+		LRK53_RS14580	0.53	-0.8
3,193,146	+		LRK53_RS14580	0.53	+0.3
3,193,146	+		LRK53_RS14580	0.53	-1.1
3,193,146	+		LRK53_RS14580	0.53	-1.6
3,193,146	+		LRK53_RS14580	0.53	+1.2
3,193,146	+		LRK53_RS14580	0.53	-1.9
3,193,146	+		LRK53_RS14580	0.53	+0.4
3,193,146	+		LRK53_RS14580	0.53	+0.0
3,193,146	+		LRK53_RS14580	0.53	-1.0
3,193,146	+		LRK53_RS14580	0.53	+0.6
3,193,146	+		LRK53_RS14580	0.53	-0.2
3,193,146	+		LRK53_RS14580	0.53	-1.0
3,193,147	-		LRK53_RS14580	0.53	+0.2
3,193,147	-		LRK53_RS14580	0.53	+0.5
3,193,147	-		LRK53_RS14580	0.53	-1.0
3,193,147	-		LRK53_RS14580	0.53	+0.4
3,193,147	-		LRK53_RS14580	0.53	+2.0
3,193,147	-		LRK53_RS14580	0.53	-0.4
3,193,147	-		LRK53_RS14580	0.53	-0.2
3,193,147	-		LRK53_RS14580	0.53	+0.0
3,193,147	-		LRK53_RS14580	0.53	-2.1
3,193,147	-		LRK53_RS14580	0.53	-1.0
3,193,147	-		LRK53_RS14580	0.53	-2.8
3,193,147	-		LRK53_RS14580	0.53	-1.6
3,193,147	-		LRK53_RS14580	0.53	-0.4
3,193,147	-		LRK53_RS14580	0.53	+0.0
3,193,147	-		LRK53_RS14580	0.53	+0.5
3,193,147	-		LRK53_RS14580	0.53	-0.5
3,193,243	+		LRK53_RS14580	0.62	-0.5
3,193,243	+		LRK53_RS14580	0.62	+2.6
3,193,243	+		LRK53_RS14580	0.62	-2.0
3,193,243	+		LRK53_RS14580	0.62	-1.1
3,193,243	+		LRK53_RS14580	0.62	+0.2
3,193,243	+		LRK53_RS14580	0.62	-0.8
3,193,243	+		LRK53_RS14580	0.62	-1.2
3,193,243	+		LRK53_RS14580	0.62	-0.8
3,193,243	+		LRK53_RS14580	0.62	+0.5
3,193,243	+		LRK53_RS14580	0.62	+0.4
3,193,244	-		LRK53_RS14580	0.62	+0.8
3,193,244	-		LRK53_RS14580	0.62	+0.8
3,193,244	-		LRK53_RS14580	0.62	-0.1
3,193,244	-		LRK53_RS14580	0.62	+0.0
3,193,244	-		LRK53_RS14580	0.62	-0.4
3,193,244	-		LRK53_RS14580	0.62	-2.0
3,193,244	-		LRK53_RS14580	0.62	-2.2
3,193,244	-		LRK53_RS14580	0.62	+0.9
3,193,244	-		LRK53_RS14580	0.62	-0.2
3,193,310	-		LRK53_RS14580	0.68	-1.7
3,193,310	-		LRK53_RS14580	0.68	-0.8
3,193,346	+		LRK53_RS14580	0.71	+0.1
3,193,347	-		LRK53_RS14580	0.72	-0.4