Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02659

Experiment: NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
2,778,317	+		MPMX19_02658	0.61	-1.0
2,778,317	+		MPMX19_02658	0.61	-2.9
2,778,317	+		MPMX19_02658	0.61	-2.5
2,778,317	+		MPMX19_02658	0.61	-1.5
2,778,317	+		MPMX19_02658	0.61	-1.0
2,778,318	-		MPMX19_02658	0.61	-0.7
2,778,318	-		MPMX19_02658	0.61	-2.1
2,778,353	+		MPMX19_02658	0.63	-2.4
2,778,353	+		MPMX19_02658	0.63	-1.7
2,778,353	+		MPMX19_02658	0.63	-2.3
2,778,353	+		MPMX19_02658	0.63	-0.9
2,778,353	+		MPMX19_02658	0.63	-2.3
2,778,353	+		MPMX19_02658	0.63	-0.7
2,778,353	+		MPMX19_02658	0.63	-1.7
2,778,353	+		MPMX19_02658	0.63	-0.9
2,778,353	+		MPMX19_02658	0.63	+1.7
2,778,353	+		MPMX19_02658	0.63	-1.9
2,778,353	+		MPMX19_02658	0.63	-1.4
2,778,354	-		MPMX19_02658	0.63	-1.7
2,778,354	-		MPMX19_02658	0.63	-0.3
2,778,354	-		MPMX19_02658	0.63	+2.1
2,778,354	-		MPMX19_02658	0.63	-1.3
2,778,354	-		MPMX19_02658	0.63	-1.3
2,778,354	-		MPMX19_02658	0.63	+0.7
2,778,354	-		MPMX19_02658	0.63	-1.7
2,778,354	-		MPMX19_02658	0.63	+0.8
2,778,354	-		MPMX19_02658	0.63	-2.2
2,778,354	-		MPMX19_02658	0.63	-2.3
2,778,354	-		MPMX19_02658	0.63	-1.3
2,778,354	-		MPMX19_02658	0.63	-1.8
2,778,368	+		MPMX19_02658	0.64	-2.5
2,778,368	+		MPMX19_02658	0.64	-0.3
2,778,369	-		MPMX19_02658	0.65	-1.6
2,778,369	-		MPMX19_02658	0.65	-0.3
2,778,369	-		MPMX19_02658	0.65	+0.1
2,778,369	-		MPMX19_02658	0.65	-2.3
2,778,369	-		MPMX19_02658	0.65	-0.1
2,778,503	+		MPMX19_02658	0.74	-1.2
2,778,503	+		MPMX19_02658	0.74	-1.3
2,778,503	+		MPMX19_02658	0.74	-3.2
2,778,503	+		MPMX19_02658	0.74	-2.7
2,778,503	+		MPMX19_02658	0.74	-2.5
2,778,503	+		MPMX19_02658	0.74	-0.2
2,778,503	+		MPMX19_02658	0.74	-1.5
2,778,503	+		MPMX19_02658	0.74	-2.4
2,778,503	+		MPMX19_02658	0.74	-1.2
2,778,503	+		MPMX19_02658	0.74	-1.3
2,778,503	+		MPMX19_02658	0.74	-3.0
2,778,503	+		MPMX19_02658	0.74	-0.7
2,778,503	+		MPMX19_02658	0.74	-0.8
2,778,503	+		MPMX19_02658	0.74	-1.2
2,778,503	+		MPMX19_02658	0.74	-0.2
2,778,503	+		MPMX19_02658	0.74	-1.9
2,778,503	+		MPMX19_02658	0.74	-0.4
2,778,503	+		MPMX19_02658	0.74	-0.4
2,778,503	+		MPMX19_02658	0.74	-1.8
2,778,504	-		MPMX19_02658	0.74	-2.1
2,778,504	-		MPMX19_02658	0.74	-1.0
2,778,504	-		MPMX19_02658	0.74	-1.3
2,778,504	-		MPMX19_02658	0.74	-1.2
2,778,504	-		MPMX19_02658	0.74	-1.3
2,778,504	-		MPMX19_02658	0.74	-0.1
2,778,504	-		MPMX19_02658	0.74	-1.5
2,778,504	-		MPMX19_02658	0.74	-2.0
2,778,504	-		MPMX19_02658	0.74	-1.3
2,778,504	-		MPMX19_02658	0.74	-2.2
2,778,504	-		MPMX19_02658	0.74	-2.3
2,778,504	-		MPMX19_02658	0.74	+0.2
2,778,504	-		MPMX19_02658	0.74	-0.7
2,778,504	-		MPMX19_02658	0.74	-2.7
2,778,504	-		MPMX19_02658	0.74	-2.2
2,778,504	-		MPMX19_02658	0.74	-0.5
2,778,504	-		MPMX19_02658	0.74	-0.8
2,778,504	-		MPMX19_02658	0.74	-1.0
2,778,504	-		MPMX19_02658	0.74	-1.7
2,778,504	-		MPMX19_02658	0.74	-2.4
2,778,504	-		MPMX19_02658	0.74	-1.8
2,778,504	-		MPMX19_02658	0.74	-2.2
2,778,638	+		MPMX19_02658	0.83	-3.3
2,778,638	+		MPMX19_02658	0.83	+0.1
2,778,638	+		MPMX19_02658	0.83	-1.4
2,778,638	+		MPMX19_02658	0.83	-1.2
2,778,638	+		MPMX19_02658	0.83	-0.9
2,778,638	+		MPMX19_02658	0.83	-1.5
2,778,638	+		MPMX19_02658	0.83	-0.6
2,778,638	+		MPMX19_02658	0.83	-3.4
2,778,638	+		MPMX19_02658	0.83	-1.8
2,778,638	+		MPMX19_02658	0.83	-1.7
2,778,639	-		MPMX19_02658	0.83	-1.0
2,778,639	-		MPMX19_02658	0.83	-1.5
2,778,639	-		MPMX19_02658	0.83	-1.2
2,778,639	-		MPMX19_02658	0.83	+0.2
2,778,639	-		MPMX19_02658	0.83	-0.2
2,778,639	-		MPMX19_02658	0.83	-0.2
2,778,639	-		MPMX19_02658	0.83	-1.8
2,778,639	-		MPMX19_02658	0.83	-1.9
2,778,639	-		MPMX19_02658	0.83	-0.2
2,778,639	-		MPMX19_02658	0.83	-1.5
2,778,639	-		MPMX19_02658	0.83	-0.3
2,778,639	-		MPMX19_02658	0.83	-2.4
2,778,639	-		MPMX19_02658	0.83	-1.8
2,778,639	-		MPMX19_02658	0.83	-2.4
2,778,639	-		MPMX19_02658	0.83	-1.0
2,778,639	-		MPMX19_02658	0.83	+0.7
2,778,639	-		MPMX19_02658	0.83	-0.2
2,778,639	-		MPMX19_02658	0.83	-2.2
2,778,639	-		MPMX19_02658	0.83	-1.9
2,778,639	-		MPMX19_02658	0.83	-1.7
2,778,639	-		MPMX19_02658	0.83	-1.3
2,778,639	-		MPMX19_02658	0.83	-3.1
2,778,639	-		MPMX19_02658	0.83	-0.2
2,778,639	-		MPMX19_02658	0.83	-2.9
2,778,639	-		MPMX19_02658	0.83	-1.8
2,778,639	-		MPMX19_02658	0.83	-1.2
2,778,785	+				-1.3
2,778,785	+				-2.6
2,778,785	+				+0.3
2,778,785	+				-2.4
2,778,785	+				-2.4
2,778,785	+				-2.0
2,778,785	+				-2.9
2,778,785	+				-1.3
2,778,785	+				-1.5
2,778,785	+				-1.2
2,778,786	-				-0.5
2,778,786	-				-2.8
2,778,786	-				-1.8
2,778,786	-				-1.9
2,778,786	-				-2.9
2,778,968	+				-1.7
2,778,968	+				-1.3
2,778,968	+				-1.4
2,778,969	-				-0.6
2,778,969	-				+0.3
2,778,969	-				+0.3
2,779,023	+				-1.2
2,779,023	+				-2.3
2,779,023	+				-1.1
2,779,023	+				-2.9
2,779,023	+				-2.6
2,779,024	-				-0.3
2,779,024	-				+0.7
2,779,024	-				+0.5
2,779,024	-				-1.3
2,779,024	-				-0.6
2,779,024	-				-0.0
2,779,025	+				-2.8
2,779,025	+				-1.7
2,779,025	+				-1.3
2,779,025	+				-2.3
2,779,026	-				-2.3
2,779,026	-				-0.7
2,779,026	-				-1.0
2,779,066	-				+0.8
2,779,066	-				-0.3
2,779,102	+				+0.5
2,779,131	+				-0.3
2,779,179	-				-0.5
2,779,179	-				+0.4
2,779,224	+				-0.2
2,779,224	+				-0.0
2,779,224	+				+0.1
2,779,224	+				-1.2
2,779,224	+				-0.5
2,779,224	+				-0.3
2,779,224	+				+0.1
2,779,224	+				+0.1
2,779,224	+				+0.0
2,779,224	+				+0.6
2,779,224	+				+0.1
2,779,224	+				+0.7
2,779,224	+				-1.4
2,779,224	+				-0.7
2,779,224	+				+0.2
2,779,225	-				-1.2
2,779,225	-				+0.3
2,779,225	-				+0.7
2,779,225	-				+0.2
2,779,225	-				-0.1
2,779,225	-				+0.3
2,779,225	-				+0.3
2,779,225	-				+0.8
2,779,225	-				-1.2
2,779,225	-				+0.4
2,779,225	-				+1.0
2,779,225	-				-0.3
2,779,225	-				-0.1
2,779,225	-				-0.8
2,779,226	+				+0.2
2,779,226	+				-0.3
2,779,226	+				+0.8
2,779,226	+				-0.3
2,779,226	+				+0.2
2,779,226	+				+1.1
2,779,227	-				-0.1
2,779,227	-				-1.7
2,779,227	-				+1.7
2,779,283	+				-1.2
2,779,283	+				-1.7
2,779,283	+				+0.8
2,779,283	+				+0.5
2,779,283	+				+0.6
2,779,283	+				+0.2
2,779,284	-				-1.5
2,779,454	+		MPMX19_02659	0.23	-1.4
2,779,454	+		MPMX19_02659	0.23	+0.1
2,779,454	+		MPMX19_02659	0.23	+0.3
2,779,454	+		MPMX19_02659	0.23	-0.7
2,779,454	+		MPMX19_02659	0.23	-1.2
2,779,454	+		MPMX19_02659	0.23	-1.3
2,779,454	+		MPMX19_02659	0.23	-0.4
2,779,454	+		MPMX19_02659	0.23	+0.7
2,779,454	+		MPMX19_02659	0.23	-1.3
2,779,454	+		MPMX19_02659	0.23	+0.3
2,779,454	+		MPMX19_02659	0.23	-1.4
2,779,455	-		MPMX19_02659	0.23	+0.9
2,779,455	-		MPMX19_02659	0.23	-0.3
2,779,455	-		MPMX19_02659	0.23	-0.4
2,779,679	+		MPMX19_02659	0.51	+0.1
2,779,871	+		MPMX19_02659	0.75	+0.1
2,779,871	+		MPMX19_02659	0.75	+0.7
2,779,872	-		MPMX19_02659	0.75	-1.3
2,779,872	-		MPMX19_02659	0.75	-1.5
2,779,880	+		MPMX19_02659	0.76	-0.9
2,779,880	+		MPMX19_02659	0.76	+0.9
2,779,880	+		MPMX19_02659	0.76	-0.9
2,779,880	+		MPMX19_02659	0.76	-1.8
2,779,881	-		MPMX19_02659	0.77	-0.3
2,779,881	-		MPMX19_02659	0.77	-0.8
2,779,881	-		MPMX19_02659	0.77	-0.3
2,779,997	+				-1.5
2,780,060	+				+0.0
2,780,060	+				+0.8
2,780,060	+				-0.9
2,780,060	+				+0.7
2,780,060	+				-0.0
2,780,060	+				-1.1
2,780,060	+				-0.8
2,780,061	-				-1.2
2,780,061	-				-0.7
2,780,061	-				-0.9
2,780,061	-				-1.5
2,780,061	-				-0.5
2,780,061	-				+2.2
2,780,061	-				+1.0
2,780,061	-				+0.6
2,780,061	-				-1.7
2,780,061	-				+1.1
2,780,061	-				-1.0
2,780,061	-				-0.5
2,780,067	-				-1.2
2,780,067	-				+0.3
2,780,067	-				+0.5
2,780,067	-				+1.4
2,780,153	+				+0.5
2,780,154	-				-1.1
2,780,294	+		MPMX19_02660	0.12	+0.7
2,780,294	+		MPMX19_02660	0.12	+0.4
2,780,294	+		MPMX19_02660	0.12	-0.7
2,780,294	+		MPMX19_02660	0.12	+0.2
2,780,294	+		MPMX19_02660	0.12	+0.9
2,780,294	+		MPMX19_02660	0.12	+0.2
2,780,294	+		MPMX19_02660	0.12	+0.2
2,780,294	+		MPMX19_02660	0.12	-0.9
2,780,294	+		MPMX19_02660	0.12	-0.3
2,780,294	+		MPMX19_02660	0.12	-0.9
2,780,295	-		MPMX19_02660	0.12	-0.4
2,780,295	-		MPMX19_02660	0.12	-0.8
2,780,295	-		MPMX19_02660	0.12	+1.5
2,780,295	-		MPMX19_02660	0.12	-0.3
2,780,295	-		MPMX19_02660	0.12	+0.3
2,780,295	-		MPMX19_02660	0.12	+0.1