Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02491

Experiment: NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
2,609,263	+		MPMX19_02489	0.77	+1.6
2,609,263	+		MPMX19_02489	0.77	-0.2
2,609,263	+		MPMX19_02489	0.77	+0.3
2,609,263	+		MPMX19_02489	0.77	+1.3
2,609,263	+		MPMX19_02489	0.77	-1.1
2,609,263	+		MPMX19_02489	0.77	+0.3
2,609,263	+		MPMX19_02489	0.77	-0.0
2,609,264	-		MPMX19_02489	0.77	+0.9
2,609,264	-		MPMX19_02489	0.77	+0.3
2,609,264	-		MPMX19_02489	0.77	+1.6
2,609,264	-		MPMX19_02489	0.77	-0.4
2,609,264	-		MPMX19_02489	0.77	+0.6
2,609,264	-		MPMX19_02489	0.77	-0.2
2,609,264	-		MPMX19_02489	0.77	+1.2
2,609,264	-		MPMX19_02489	0.77	-2.2
2,609,264	-		MPMX19_02489	0.77	-0.5
2,609,264	-		MPMX19_02489	0.77	+0.6
2,609,327	+		MPMX19_02489	0.89	+2.2
2,609,327	+		MPMX19_02489	0.89	+0.8
2,609,327	+		MPMX19_02489	0.89	+0.3
2,609,328	-		MPMX19_02489	0.90	-0.8
2,609,328	-		MPMX19_02489	0.90	+0.2
2,609,328	-		MPMX19_02489	0.90	-0.3
2,609,387	+				-1.7
2,609,387	+				-0.4
2,609,388	-				-0.8
2,609,388	-				-2.4
2,609,388	-				-0.5
2,609,401	+				+0.8
2,609,401	+				+0.2
2,609,401	+				-0.5
2,609,402	-				+0.4
2,609,402	-				+2.1
2,609,402	-				-0.5
2,609,402	-				-0.5
2,609,402	-				+1.2
2,609,470	+				-0.9
2,609,470	+				+0.8
2,609,470	+				-0.2
2,609,470	+				-0.4
2,609,470	+				+0.5
2,609,470	+				-1.2
2,609,471	-				-0.9
2,609,471	-				-0.4
2,609,471	-				+0.5
2,609,471	-				-0.5
2,609,471	-				+0.1
2,609,471	-				+0.1
2,609,471	-				-0.7
2,609,471	-				+0.1
2,609,471	-				-0.5
2,609,471	-				-0.6
2,609,471	-				+0.8
2,609,574	+		MPMX19_02490	0.22	+0.2
2,609,575	-		MPMX19_02490	0.22	-1.5
2,609,575	-		MPMX19_02490	0.22	+1.0
2,609,575	-		MPMX19_02490	0.22	-0.9
2,609,596	+		MPMX19_02490	0.25	-1.2
2,609,596	+		MPMX19_02490	0.25	-1.4
2,609,596	+		MPMX19_02490	0.25	-2.1
2,609,596	+		MPMX19_02490	0.25	-0.3
2,609,596	+		MPMX19_02490	0.25	-0.5
2,609,596	+		MPMX19_02490	0.25	+1.2
2,609,596	+		MPMX19_02490	0.25	-0.5
2,609,596	+		MPMX19_02490	0.25	+0.8
2,609,596	+		MPMX19_02490	0.25	-1.7
2,609,596	+		MPMX19_02490	0.25	-2.4
2,609,596	+		MPMX19_02490	0.25	+0.0
2,609,596	+		MPMX19_02490	0.25	+0.1
2,609,596	+		MPMX19_02490	0.25	-1.7
2,609,596	+		MPMX19_02490	0.25	+0.2
2,609,596	+		MPMX19_02490	0.25	-1.1
2,609,596	+		MPMX19_02490	0.25	-2.5
2,609,597	-		MPMX19_02490	0.25	-1.4
2,609,597	-		MPMX19_02490	0.25	+0.8
2,609,597	-		MPMX19_02490	0.25	+0.3
2,609,597	-		MPMX19_02490	0.25	+0.3
2,609,597	-		MPMX19_02490	0.25	-0.8
2,609,597	-		MPMX19_02490	0.25	-1.7
2,609,597	-		MPMX19_02490	0.25	+1.9
2,609,597	-		MPMX19_02490	0.25	-1.7
2,609,597	-		MPMX19_02490	0.25	-2.1
2,609,597	-		MPMX19_02490	0.25	+0.1
2,609,597	-		MPMX19_02490	0.25	-0.4
2,609,597	-		MPMX19_02490	0.25	+0.2
2,609,597	-		MPMX19_02490	0.25	-1.4
2,609,597	-		MPMX19_02490	0.25	-0.8
2,609,597	-		MPMX19_02490	0.25	-1.2
2,609,597	-		MPMX19_02490	0.25	+0.2
2,609,597	-		MPMX19_02490	0.25	+1.3
2,609,597	-		MPMX19_02490	0.25	+0.2
2,609,597	-		MPMX19_02490	0.25	-1.1
2,609,597	-		MPMX19_02490	0.25	-0.6
2,609,597	-		MPMX19_02490	0.25	+0.1
2,609,597	-		MPMX19_02490	0.25	-0.9
2,609,597	-		MPMX19_02490	0.25	-0.7
2,609,597	-		MPMX19_02490	0.25	-0.7
2,609,597	-		MPMX19_02490	0.25	+0.9
2,609,597	-		MPMX19_02490	0.25	+0.8
2,609,626	+		MPMX19_02490	0.29	-1.3
2,609,626	+		MPMX19_02490	0.29	+0.3
2,609,626	+		MPMX19_02490	0.29	-0.2
2,609,626	+		MPMX19_02490	0.29	-0.3
2,609,626	+		MPMX19_02490	0.29	+0.6
2,609,626	+		MPMX19_02490	0.29	-1.1
2,609,626	+		MPMX19_02490	0.29	-1.2
2,609,626	+		MPMX19_02490	0.29	-0.4
2,609,626	+		MPMX19_02490	0.29	-1.2
2,609,626	+		MPMX19_02490	0.29	-1.9
2,609,626	+		MPMX19_02490	0.29	-1.4
2,609,626	+		MPMX19_02490	0.29	-0.0
2,609,626	+		MPMX19_02490	0.29	+0.5
2,609,626	+		MPMX19_02490	0.29	-0.5
2,609,627	-		MPMX19_02490	0.29	+0.2
2,609,627	-		MPMX19_02490	0.29	-0.7
2,609,627	-		MPMX19_02490	0.29	-0.2
2,609,627	-		MPMX19_02490	0.29	-3.2
2,609,627	-		MPMX19_02490	0.29	-0.4
2,609,627	-		MPMX19_02490	0.29	-0.7
2,609,627	-		MPMX19_02490	0.29	-0.2
2,609,627	-		MPMX19_02490	0.29	+0.5
2,609,627	-		MPMX19_02490	0.29	-2.4
2,609,627	-		MPMX19_02490	0.29	-0.5
2,609,627	-		MPMX19_02490	0.29	+0.9
2,609,627	-		MPMX19_02490	0.29	-0.5
2,609,627	-		MPMX19_02490	0.29	-1.1
2,609,627	-		MPMX19_02490	0.29	+0.4
2,609,686	+		MPMX19_02490	0.37	-1.2
2,609,686	+		MPMX19_02490	0.37	-0.7
2,609,686	+		MPMX19_02490	0.37	+0.6
2,609,686	+		MPMX19_02490	0.37	-0.9
2,609,686	+		MPMX19_02490	0.37	-1.4
2,609,686	+		MPMX19_02490	0.37	-0.9
2,609,687	-		MPMX19_02490	0.37	-0.4
2,609,687	-		MPMX19_02490	0.37	+1.2
2,609,687	-		MPMX19_02490	0.37	-0.9
2,609,687	-		MPMX19_02490	0.37	-0.7
2,609,687	-		MPMX19_02490	0.37	-0.6
2,609,687	-		MPMX19_02490	0.37	+0.2
2,609,687	-		MPMX19_02490	0.37	-0.3
2,609,728	+		MPMX19_02490	0.42	-0.1
2,609,729	-		MPMX19_02490	0.42	+0.4
2,609,729	-		MPMX19_02490	0.42	+1.6
2,609,857	+		MPMX19_02490	0.58	-1.5
2,609,857	+		MPMX19_02490	0.58	-0.5
2,609,857	+		MPMX19_02490	0.58	-0.7
2,609,857	+		MPMX19_02490	0.58	+1.0
2,609,857	+		MPMX19_02490	0.58	-2.7
2,609,857	+		MPMX19_02490	0.58	-1.3
2,609,857	+		MPMX19_02490	0.58	+0.1
2,609,858	-		MPMX19_02490	0.58	-1.0
2,609,858	-		MPMX19_02490	0.58	+0.8
2,609,858	-		MPMX19_02490	0.58	-0.2
2,609,858	-		MPMX19_02490	0.58	-0.9
2,610,171	-				-0.7
2,610,207	+				-0.4
2,610,207	+				-1.3
2,610,207	+				+0.1
2,610,207	+				-0.6
2,610,207	+				-0.2
2,610,207	+				+0.1
2,610,207	+				+0.1
2,610,207	+				+1.1
2,610,207	+				-0.8
2,610,207	+				-3.0
2,610,207	+				+0.2
2,610,207	+				-0.7
2,610,207	+				+0.3
2,610,207	+				-1.1
2,610,207	+				-2.6
2,610,207	+				+1.6
2,610,208	-				+2.0
2,610,208	-				+1.6
2,610,208	-				+0.6
2,610,208	-				-2.2
2,610,208	-				-0.9
2,610,208	-				+1.6
2,610,208	-				+0.8
2,610,208	-				+0.9
2,610,208	-				-1.5
2,610,208	-				-0.2
2,610,208	-				-0.3
2,610,208	-				-0.3
2,610,208	-				+0.4
2,610,208	-				+1.4
2,610,208	-				-0.4
2,610,208	-				+1.3
2,610,208	-				-0.4
2,610,208	-				+1.3
2,610,486	+		MPMX19_02491	0.33	+1.2
2,610,486	+		MPMX19_02491	0.33	-0.2
2,610,486	+		MPMX19_02491	0.33	+0.2
2,610,486	+		MPMX19_02491	0.33	+1.1
2,610,486	+		MPMX19_02491	0.33	+0.9
2,610,486	+		MPMX19_02491	0.33	-0.4
2,610,486	+		MPMX19_02491	0.33	+0.3
2,610,486	+		MPMX19_02491	0.33	-1.3
2,610,486	+		MPMX19_02491	0.33	-1.5
2,610,486	+		MPMX19_02491	0.33	-1.0
2,610,486	+		MPMX19_02491	0.33	-0.6
2,610,486	+		MPMX19_02491	0.33	-0.1
2,610,486	+		MPMX19_02491	0.33	+1.9
2,610,486	+		MPMX19_02491	0.33	+1.3
2,610,486	+		MPMX19_02491	0.33	+0.4
2,610,486	+		MPMX19_02491	0.33	-2.4
2,610,486	+		MPMX19_02491	0.33	-1.4
2,610,486	+		MPMX19_02491	0.33	-0.4
2,610,486	+		MPMX19_02491	0.33	-0.6
2,610,486	+		MPMX19_02491	0.33	-0.0
2,610,487	-		MPMX19_02491	0.33	-2.5
2,610,487	-		MPMX19_02491	0.33	-2.5
2,610,487	-		MPMX19_02491	0.33	-0.5
2,610,487	-		MPMX19_02491	0.33	-2.4
2,610,487	-		MPMX19_02491	0.33	-1.3
2,610,487	-		MPMX19_02491	0.33	-0.9
2,610,487	-		MPMX19_02491	0.33	+0.1
2,610,487	-		MPMX19_02491	0.33	+0.1
2,610,487	-		MPMX19_02491	0.33	-0.5
2,610,487	-		MPMX19_02491	0.33	+0.9
2,610,487	-		MPMX19_02491	0.33	+0.7
2,610,487	-		MPMX19_02491	0.33	-2.1
2,610,487	-		MPMX19_02491	0.33	-1.7
2,610,487	-		MPMX19_02491	0.33	-1.1
2,610,487	-		MPMX19_02491	0.33	+0.3
2,610,487	-		MPMX19_02491	0.33	-1.2
2,610,487	-		MPMX19_02491	0.33	-1.3
2,610,487	-		MPMX19_02491	0.33	-1.4
2,610,487	-		MPMX19_02491	0.33	-0.9
2,610,487	-		MPMX19_02491	0.33	-0.8
2,610,588	+		MPMX19_02491	0.44	-0.7
2,610,588	+		MPMX19_02491	0.44	+1.5
2,610,588	+		MPMX19_02491	0.44	-0.9
2,610,588	+		MPMX19_02491	0.44	-2.7
2,610,588	+		MPMX19_02491	0.44	-0.1
2,610,588	+		MPMX19_02491	0.44	-2.5
2,610,588	+		MPMX19_02491	0.44	+0.3
2,610,588	+		MPMX19_02491	0.44	-0.2
2,610,588	+		MPMX19_02491	0.44	-0.8
2,610,588	+		MPMX19_02491	0.44	+0.2
2,610,588	+		MPMX19_02491	0.44	-0.7
2,610,588	+		MPMX19_02491	0.44	-2.3
2,610,588	+		MPMX19_02491	0.44	-0.8
2,610,589	-		MPMX19_02491	0.44	+1.6
2,610,589	-		MPMX19_02491	0.44	-0.2
2,610,589	-		MPMX19_02491	0.44	-0.2
2,610,589	-		MPMX19_02491	0.44	+1.1
2,610,589	-		MPMX19_02491	0.44	-0.6
2,610,589	-		MPMX19_02491	0.44	+0.1
2,610,589	-		MPMX19_02491	0.44	+1.0
2,610,589	-		MPMX19_02491	0.44	-1.8
2,610,589	-		MPMX19_02491	0.44	-1.2
2,610,589	-		MPMX19_02491	0.44	+0.6
2,610,589	-		MPMX19_02491	0.44	-0.4
2,610,589	-		MPMX19_02491	0.44	-0.1
2,610,589	-		MPMX19_02491	0.44	-0.6
2,610,589	-		MPMX19_02491	0.44	-1.0
2,610,747	+		MPMX19_02491	0.62	+0.4
2,610,747	+		MPMX19_02491	0.62	+0.6
2,610,747	+		MPMX19_02491	0.62	-0.6
2,610,747	+		MPMX19_02491	0.62	-1.9
2,610,747	+		MPMX19_02491	0.62	+0.8
2,610,747	+		MPMX19_02491	0.62	+0.0
2,610,747	+		MPMX19_02491	0.62	+1.1
2,610,747	+		MPMX19_02491	0.62	+0.1
2,610,747	+		MPMX19_02491	0.62	-0.6
2,610,747	+		MPMX19_02491	0.62	-1.8
2,610,747	+		MPMX19_02491	0.62	-0.4
2,610,747	+		MPMX19_02491	0.62	+0.3
2,610,747	+		MPMX19_02491	0.62	+0.1
2,610,747	+		MPMX19_02491	0.62	+0.1
2,610,747	+		MPMX19_02491	0.62	-1.5
2,610,747	+		MPMX19_02491	0.62	+0.7
2,610,747	+		MPMX19_02491	0.62	-1.7
2,610,748	-		MPMX19_02491	0.62	-0.4
2,610,748	-		MPMX19_02491	0.62	-1.4
2,610,748	-		MPMX19_02491	0.62	-0.4
2,610,748	-		MPMX19_02491	0.62	+0.1
2,610,748	-		MPMX19_02491	0.62	+0.8
2,610,748	-		MPMX19_02491	0.62	+1.2
2,610,748	-		MPMX19_02491	0.62	-0.9
2,610,748	-		MPMX19_02491	0.62	+0.5
2,610,748	-		MPMX19_02491	0.62	-1.4
2,610,748	-		MPMX19_02491	0.62	-0.8
2,610,748	-		MPMX19_02491	0.62	+2.1
2,610,748	-		MPMX19_02491	0.62	-0.6
2,610,748	-		MPMX19_02491	0.62	-0.8
2,610,748	-		MPMX19_02491	0.62	-1.4
2,610,748	-		MPMX19_02491	0.62	-0.1
2,610,748	-		MPMX19_02491	0.62	-2.6
2,611,089	+				-0.1
2,611,089	+				-0.3
2,611,089	+				-1.0
2,611,089	+				-1.5
2,611,089	+				-0.7
2,611,089	+				-0.1
2,611,089	+				-0.7
2,611,089	+				+2.0
2,611,089	+				-0.6
2,611,089	+				-1.7
2,611,089	+				-1.4
2,611,089	+				+0.2
2,611,089	+				-0.2
2,611,089	+				+0.6
2,611,089	+				-1.0
2,611,089	+				+0.5
2,611,090	-				-1.3
2,611,090	-				+0.3
2,611,090	-				-0.7
2,611,090	-				-1.1
2,611,090	-				-0.4
2,611,090	-				-0.5
2,611,090	-				-2.7
2,611,090	-				-1.0
2,611,090	-				+0.1
2,611,197	+				-0.0
2,611,197	+				+0.8
2,611,198	-				-0.4
2,611,198	-				-1.8
2,611,198	-				+1.2
2,611,198	-				+0.2
2,611,198	-				+0.4
2,611,198	-				+1.4
2,611,198	-				+0.1
2,611,198	-				-0.7
2,611,370	+				+0.2
2,611,370	+				-1.4
2,611,370	+				-1.4
2,611,370	+				-0.7
2,611,370	+				-1.4
2,611,370	+				-0.5
2,611,370	+				-1.7
2,611,370	+				-0.5
2,611,370	+				-0.4
2,611,371	-				-0.2
2,611,371	-				+0.1
2,611,371	-				+1.2
2,611,371	-				-0.7
2,611,371	-				-1.4
2,611,383	+				+0.2
2,611,384	-				+0.3
2,611,384	-				-0.0
2,611,425	+				-1.4
2,611,425	+				+1.2
2,611,425	+				+1.0
2,611,425	+				+0.7
2,611,426	-				+0.9
2,611,426	-				-1.2
2,611,426	-				-1.2
2,611,549	-				+0.3
2,611,572	+		MPMX19_02492	0.12	-0.5
2,611,572	+		MPMX19_02492	0.12	+0.9
2,611,572	+		MPMX19_02492	0.12	+0.3
2,611,572	+		MPMX19_02492	0.12	+0.5
2,611,572	+		MPMX19_02492	0.12	-0.1
2,611,572	+		MPMX19_02492	0.12	+0.3
2,611,572	+		MPMX19_02492	0.12	-1.1
2,611,572	+		MPMX19_02492	0.12	+0.1
2,611,578	+		MPMX19_02492	0.12	-0.3
2,611,578	+		MPMX19_02492	0.12	-1.1
2,611,578	+		MPMX19_02492	0.12	-0.9
2,611,578	+		MPMX19_02492	0.12	+0.9
2,611,578	+		MPMX19_02492	0.12	+0.9