Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02310

Experiment: NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
2,430,262	+		MPMX19_02308	0.63	+1.2
2,430,262	+		MPMX19_02308	0.63	+0.6
2,430,262	+		MPMX19_02308	0.63	-0.7
2,430,262	+		MPMX19_02308	0.63	+0.6
2,430,262	+		MPMX19_02308	0.63	+0.5
2,430,262	+		MPMX19_02308	0.63	-1.4
2,430,262	+		MPMX19_02308	0.63	+1.1
2,430,262	+		MPMX19_02308	0.63	-0.3
2,430,263	-		MPMX19_02308	0.63	+0.9
2,430,263	-		MPMX19_02308	0.63	+0.8
2,430,263	-		MPMX19_02308	0.63	+1.2
2,430,263	-		MPMX19_02308	0.63	-1.2
2,430,263	-		MPMX19_02308	0.63	+0.8
2,430,263	-		MPMX19_02308	0.63	+0.1
2,430,263	-		MPMX19_02308	0.63	+0.9
2,430,263	-		MPMX19_02308	0.63	-0.4
2,430,263	-		MPMX19_02308	0.63	+0.2
2,430,263	-		MPMX19_02308	0.63	+0.5
2,430,263	-		MPMX19_02308	0.63	-0.6
2,430,476	+				-1.8
2,430,476	+				-0.7
2,430,476	+				-0.7
2,430,477	-				-0.8
2,430,477	-				-0.8
2,430,477	-				-0.2
2,430,483	+				-0.5
2,430,483	+				+0.3
2,430,484	-				+0.3
2,430,484	-				-0.7
2,430,484	-				-1.2
2,430,484	-				-1.0
2,430,484	-				-2.1
2,430,531	+				+0.0
2,430,531	+				+0.3
2,430,531	+				-0.1
2,430,531	+				-2.5
2,430,531	+				+0.3
2,430,532	-				-0.8
2,430,532	-				-1.2
2,430,532	-				+0.6
2,430,562	+				+0.7
2,430,563	-				+0.5
2,430,563	-				+0.4
2,430,563	-				-0.5
2,430,563	-				+1.2
2,430,646	+				-0.5
2,430,646	+				+0.7
2,430,646	+				-1.6
2,430,646	+				+1.0
2,430,646	+				+0.9
2,430,646	+				+0.0
2,430,646	+				-0.5
2,430,646	+				-2.0
2,430,647	-				-1.2
2,430,647	-				-1.8
2,430,647	-				-2.0
2,430,647	-				+0.0
2,430,647	-				-0.7
2,430,647	-				+0.0
2,430,647	-				+0.4
2,430,647	-				+1.3
2,430,647	-				-1.0
2,430,647	-				-1.5
2,430,647	-				-0.9
2,430,647	-				+0.0
2,430,660	+				-0.1
2,430,681	+				-1.3
2,430,681	+				-0.4
2,430,681	+				-0.5
2,430,681	+				-1.2
2,430,681	+				-1.5
2,430,681	+				-0.8
2,430,681	+				-0.8
2,430,681	+				+0.4
2,430,682	-				+0.2
2,430,682	-				+1.1
2,430,682	-				-1.0
2,430,682	-				-0.7
2,430,682	-				+1.0
2,430,682	-				-0.2
2,430,682	-				-0.1
2,430,682	-				-1.1
2,430,682	-				-0.3
2,430,682	-				+0.6
2,430,682	-				+0.7
2,430,682	-				-1.4
2,430,682	-				+0.6
2,430,711	+				+0.8
2,430,711	+				-1.7
2,430,711	+				-2.1
2,430,711	+				+0.0
2,430,711	+				-1.4
2,430,711	+				+1.0
2,430,711	+				+1.3
2,430,711	+				+0.5
2,430,712	-				-0.1
2,430,712	-				-0.7
2,430,712	-				-0.4
2,430,712	-				-0.4
2,430,712	-				-0.9
2,430,712	-				-1.7
2,430,713	+				+1.1
2,430,714	-				-1.6
2,430,714	-				-1.1
2,430,714	-				+0.6
2,430,724	+				+0.9
2,430,724	+				-2.5
2,430,724	+				-0.7
2,430,724	+				-0.2
2,430,725	-				-0.2
2,430,725	-				-0.7
2,430,725	-				-0.5
2,430,732	+				+1.0
2,430,732	+				-1.1
2,430,732	+				+0.6
2,430,732	+				-1.3
2,430,732	+				+0.5
2,430,732	+				+0.0
2,430,732	+				-0.1
2,430,732	+				-0.4
2,430,732	+				-1.0
2,430,732	+				+1.3
2,430,732	+				+1.4
2,430,732	+				+0.2
2,430,732	+				-0.7
2,430,732	+				-0.7
2,430,732	+				-0.9
2,430,732	+				-1.6
2,430,732	+				-3.0
2,430,732	+				-1.6
2,430,733	-				-0.4
2,430,733	-				+0.5
2,430,733	-				-1.6
2,430,733	-				-2.1
2,430,733	-				+1.5
2,430,733	-				-0.5
2,430,733	-				-1.7
2,430,733	-				+0.3
2,430,733	-				-0.1
2,430,733	-				-0.6
2,430,733	-				+0.4
2,430,733	-				+1.4
2,430,733	-				-0.4
2,430,733	-				-1.0
2,430,733	-				-0.6
2,430,733	-				-0.7
2,430,733	-				-1.8
2,430,765	+				-1.0
2,430,766	-				-1.2
2,430,788	+				+0.7
2,430,788	+				-0.4
2,430,788	+				-0.6
2,430,788	+				+0.2
2,430,788	+				-0.9
2,430,788	+				+0.1
2,430,788	+				-0.5
2,430,788	+				-2.1
2,430,789	-				-0.6
2,430,789	-				+0.8
2,430,789	-				-0.9
2,430,789	-				+1.3
2,430,789	-				-0.1
2,430,789	-				+0.6
2,430,789	-				-0.4
2,430,789	-				-0.4
2,430,789	-				-0.0
2,430,789	-				-0.1
2,430,789	-				-0.8
2,430,789	-				+0.9
2,430,792	+				-0.1
2,430,792	+				-0.4
2,430,792	+				-1.0
2,430,792	+				-1.8
2,430,792	+				+0.3
2,430,792	+				-0.1
2,430,792	+				+0.2
2,430,792	+				-1.5
2,430,792	+				-1.8
2,430,792	+				-0.2
2,430,792	+				+0.6
2,430,792	+				+0.5
2,430,792	+				-0.5
2,430,792	+				+0.3
2,430,792	+				-1.4
2,430,792	+				+0.4
2,430,792	+				-0.4
2,430,793	-				+1.0
2,430,793	-				-0.4
2,430,793	-				-0.5
2,430,793	-				-0.1
2,430,793	-				-0.6
2,430,793	-				+0.6
2,430,793	-				-0.9
2,430,795	+				+0.2
2,430,796	-				-0.4
2,430,796	-				-0.1
2,430,836	+				+0.0
2,430,836	+				-1.0
2,430,836	+				-0.3
2,430,836	+				-0.2
2,430,836	+				-0.5
2,430,836	+				-0.2
2,430,836	+				-1.3
2,430,836	+				+0.2
2,430,836	+				+0.6
2,430,836	+				+0.4
2,430,836	+				-1.8
2,430,837	-				-1.9
2,430,837	-				+0.0
2,430,837	-				-1.4
2,430,837	-				-1.6
2,430,837	-				+0.7
2,430,969	+		MPMX19_02309	0.46	-0.6
2,430,969	+		MPMX19_02309	0.46	+0.2
2,430,969	+		MPMX19_02309	0.46	-0.2
2,430,969	+		MPMX19_02309	0.46	-0.4
2,430,969	+		MPMX19_02309	0.46	-0.0
2,430,969	+		MPMX19_02309	0.46	+0.5
2,430,969	+		MPMX19_02309	0.46	-1.4
2,430,969	+		MPMX19_02309	0.46	-0.4
2,430,969	+		MPMX19_02309	0.46	-0.4
2,430,969	+		MPMX19_02309	0.46	-0.1
2,430,969	+		MPMX19_02309	0.46	-2.2
2,430,969	+		MPMX19_02309	0.46	-0.7
2,430,969	+		MPMX19_02309	0.46	-0.8
2,430,969	+		MPMX19_02309	0.46	-0.5
2,430,969	+		MPMX19_02309	0.46	+0.3
2,430,970	-		MPMX19_02309	0.46	-1.2
2,430,970	-		MPMX19_02309	0.46	-0.4
2,430,970	-		MPMX19_02309	0.46	-1.1
2,430,970	-		MPMX19_02309	0.46	+0.2
2,430,970	-		MPMX19_02309	0.46	+0.1
2,430,970	-		MPMX19_02309	0.46	+1.0
2,430,970	-		MPMX19_02309	0.46	+0.2
2,431,062	+				-0.2
2,431,062	+				-1.0
2,431,062	+				-0.2
2,431,062	+				-1.5
2,431,062	+				-1.1
2,431,063	-				-0.4
2,431,063	-				-0.4
2,431,063	-				-0.7
2,431,154	+				-1.6
2,431,155	-		MPMX19_02310	0.10	+2.4
2,431,155	-		MPMX19_02310	0.10	+0.1
2,431,450	+		MPMX19_02310	0.41	-0.1
2,431,450	+		MPMX19_02310	0.41	-0.0
2,431,671	+		MPMX19_02310	0.65	+1.5
2,431,692	+		MPMX19_02310	0.67	-0.7
2,431,692	+		MPMX19_02310	0.67	+0.4
2,431,692	+		MPMX19_02310	0.67	-0.5
2,431,693	-		MPMX19_02310	0.67	+1.5
2,431,693	-		MPMX19_02310	0.67	-0.2
2,431,693	-		MPMX19_02310	0.67	-0.1
2,431,693	-		MPMX19_02310	0.67	-0.3
2,431,693	-		MPMX19_02310	0.67	+0.2
2,432,021	+				+0.5
2,432,021	+				-1.4
2,432,021	+				-1.0
2,432,023	+				-0.5
2,432,023	+				-0.1
2,432,023	+				-0.9
2,432,023	+				-1.0
2,432,023	+				+0.8
2,432,023	+				-0.2
2,432,024	-				-0.2
2,432,024	-				-0.2
2,432,024	-				+0.5
2,432,024	-				-2.1
2,432,024	-				+0.1
2,432,024	-				-1.2
2,432,024	-				+0.6
2,432,024	-				+0.0
2,432,024	-				+1.2
2,432,024	-				-1.4
2,432,034	+				-0.4
2,432,034	+				+0.5
2,432,035	-				-0.3
2,432,041	+				+0.7
2,432,041	+				+1.0
2,432,041	+				+1.6
2,432,042	-				-0.3
2,432,042	-				-0.4
2,432,042	-				+1.0
2,432,275	+		MPMX19_02311	0.33	-1.4
2,432,275	+		MPMX19_02311	0.33	-0.4
2,432,275	+		MPMX19_02311	0.33	-0.3
2,432,275	+		MPMX19_02311	0.33	+0.1
2,432,275	+		MPMX19_02311	0.33	-1.0
2,432,275	+		MPMX19_02311	0.33	-2.3
2,432,275	+		MPMX19_02311	0.33	+0.5
2,432,275	+		MPMX19_02311	0.33	-0.3
2,432,275	+		MPMX19_02311	0.33	+0.3
2,432,275	+		MPMX19_02311	0.33	+0.3
2,432,275	+		MPMX19_02311	0.33	-1.0
2,432,275	+		MPMX19_02311	0.33	-2.3
2,432,275	+		MPMX19_02311	0.33	-1.2
2,432,275	+		MPMX19_02311	0.33	-0.3
2,432,276	-		MPMX19_02311	0.34	+0.4
2,432,276	-		MPMX19_02311	0.34	+0.7
2,432,276	-		MPMX19_02311	0.34	+0.5
2,432,276	-		MPMX19_02311	0.34	+1.1
2,432,276	-		MPMX19_02311	0.34	+0.5
2,432,276	-		MPMX19_02311	0.34	+0.0
2,432,276	-		MPMX19_02311	0.34	-0.1
2,432,276	-		MPMX19_02311	0.34	+0.1
2,432,276	-		MPMX19_02311	0.34	-0.2
2,432,276	-		MPMX19_02311	0.34	+0.2
2,432,276	-		MPMX19_02311	0.34	-0.5
2,432,276	-		MPMX19_02311	0.34	-0.5
2,432,276	-		MPMX19_02311	0.34	-1.4
2,432,276	-		MPMX19_02311	0.34	-0.2
2,432,276	-		MPMX19_02311	0.34	-2.0
2,432,276	-		MPMX19_02311	0.34	-1.4
2,432,398	+		MPMX19_02311	0.60	-1.7
2,432,398	+		MPMX19_02311	0.60	-1.9
2,432,398	+		MPMX19_02311	0.60	-0.2
2,432,398	+		MPMX19_02311	0.60	-0.1
2,432,398	+		MPMX19_02311	0.60	-1.3
2,432,398	+		MPMX19_02311	0.60	-1.3
2,432,398	+		MPMX19_02311	0.60	+0.9
2,432,399	-		MPMX19_02311	0.61	-0.5
2,432,399	-		MPMX19_02311	0.61	+0.8
2,432,399	-		MPMX19_02311	0.61	+0.0
2,432,399	-		MPMX19_02311	0.61	-0.1
2,432,399	-		MPMX19_02311	0.61	+2.3
2,432,399	-		MPMX19_02311	0.61	+0.4
2,432,399	-		MPMX19_02311	0.61	+0.1
2,432,399	-		MPMX19_02311	0.61	-2.3
2,432,399	-		MPMX19_02311	0.61	-0.8
2,432,399	-		MPMX19_02311	0.61	-1.4
2,432,434	+		MPMX19_02311	0.68	-0.4
2,432,434	+		MPMX19_02311	0.68	-1.8
2,432,434	+		MPMX19_02311	0.68	-0.7
2,432,434	+		MPMX19_02311	0.68	-1.1
2,432,434	+		MPMX19_02311	0.68	-1.1
2,432,434	+		MPMX19_02311	0.68	-0.5
2,432,434	+		MPMX19_02311	0.68	-0.4
2,432,434	+		MPMX19_02311	0.68	+0.5
2,432,434	+		MPMX19_02311	0.68	-1.2
2,432,434	+		MPMX19_02311	0.68	-2.0
2,432,434	+		MPMX19_02311	0.68	-1.2
2,432,434	+		MPMX19_02311	0.68	+0.6
2,432,434	+		MPMX19_02311	0.68	-0.2
2,432,434	+		MPMX19_02311	0.68	+0.4
2,432,434	+		MPMX19_02311	0.68	-0.1
2,432,435	-		MPMX19_02311	0.69	+0.8
2,432,435	-		MPMX19_02311	0.69	+1.1
2,432,435	-		MPMX19_02311	0.69	+0.2
2,432,435	-		MPMX19_02311	0.69	-0.0
2,432,435	-		MPMX19_02311	0.69	+0.6
2,432,435	-		MPMX19_02311	0.69	-2.2
2,432,435	-		MPMX19_02311	0.69	+1.6
2,432,435	-		MPMX19_02311	0.69	+0.0
2,432,435	-		MPMX19_02311	0.69	-0.4
2,432,435	-		MPMX19_02311	0.69	-1.1
2,432,435	-		MPMX19_02311	0.69	+0.4
2,432,435	-		MPMX19_02311	0.69	+0.0
2,432,435	-		MPMX19_02311	0.69	-1.4
2,432,435	-		MPMX19_02311	0.69	+0.2
2,432,435	-		MPMX19_02311	0.69	+0.7
2,432,435	-		MPMX19_02311	0.69	+1.1
2,432,435	-		MPMX19_02311	0.69	-0.3
2,432,435	-		MPMX19_02311	0.69	-1.0
2,432,435	-		MPMX19_02311	0.69	-0.2
2,432,504	-		MPMX19_02311	0.84	-2.1
2,432,504	-		MPMX19_02311	0.84	+0.1
2,432,558	+				-0.1
2,432,558	+				+0.8
2,432,558	+				-0.5
2,432,630	+				-0.9
2,432,631	-				+0.8
2,432,631	-				+1.1
2,432,631	-				-2.3
2,432,664	+				-0.5
2,432,664	+				+0.5
2,432,664	+				-0.4
2,432,664	+				-0.5
2,432,664	+				-0.6
2,432,664	+				-2.8
2,432,664	+				+0.4
2,432,664	+				-0.9
2,432,664	+				-1.1
2,432,664	+				+3.0
2,432,664	+				+0.0
2,432,664	+				+0.8
2,432,664	+				-0.4
2,432,664	+				+0.0
2,432,664	+				+0.5
2,432,664	+				+0.3
2,432,664	+				+1.0
2,432,664	+				-1.1
2,432,664	+				-1.3
2,432,664	+				-0.9
2,432,664	+				-0.0
2,432,664	+				+1.5
2,432,664	+				-1.2
2,432,665	-				-0.8
2,432,665	-				+0.8
2,432,665	-				-1.0
2,432,665	-				-0.1
2,432,665	-				+0.4
2,432,665	-				-0.0
2,432,665	-				+0.6
2,432,665	-				+0.0
2,432,665	-				+0.3
2,432,665	-				-0.7
2,432,665	-				+0.0
2,432,665	-				-0.8
2,432,665	-				-0.7
2,432,665	-				+0.6
2,432,665	-				+0.3
2,432,665	-				-2.5
2,432,665	-				-2.3
2,432,665	-				-1.1
2,432,665	-				+0.5
2,432,665	-				-2.0
2,432,665	-				+0.3
2,432,665	-				-0.6
2,432,665	-				-2.1
2,432,665	-				-0.2
2,432,711	+				+0.6
2,432,711	+				-1.2
2,432,750	+				+0.3
2,432,751	-				+1.4
2,432,751	-				-0.6
2,432,751	-				+0.8
2,432,809	+				-1.2
2,432,809	+				+0.0
2,432,809	+				-1.1
2,432,809	+				+1.2
2,432,809	+				-2.1
2,432,809	+				-1.3
2,432,809	+				+0.3
2,432,809	+				-0.3
2,432,810	-				-0.2
2,432,810	-				-0.5
2,432,810	-				-1.7
2,432,810	-				-1.4
2,432,810	-				+1.0
2,432,810	-				-1.9
2,432,810	-				-0.2
2,432,810	-				+0.5
2,432,810	-				+0.9
2,432,810	-				+1.4
2,432,810	-				-0.2
2,432,834	+				-0.2
2,432,834	+				-1.7
2,432,834	+				-2.1
2,432,835	-				+0.0
2,432,835	-				+0.2
2,432,835	-				-0.8