Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF808 and GFF809 are separated by 17 nucleotides GFF809 and GFF810 are separated by 18 nucleotides GFF810 and GFF811 are separated by 133 nucleotides
GFF808 - Dimethyl-sulfide monooxygenase, at 864,035 to 865,414
GFF808
GFF809 - hypothetical protein, at 865,432 to 865,626
GFF809
GFF810 - Dimethyl-sulfide monooxygenase, at 865,645 to 867,093
GFF810
GFF811 - Thiosulfate sulfurtransferase GlpE, at 867,227 to 868,864
GFF811
Position (kb) 865
866
867
868 Strain fitness (log2 ratio) -2
-1
0
1
2 at 864.747 kb on + strand, within GFF808 at 864.747 kb on + strand, within GFF808 at 864.747 kb on + strand, within GFF808 at 864.909 kb on + strand, within GFF808 at 864.910 kb on - strand, within GFF808 at 864.910 kb on - strand, within GFF808 at 864.910 kb on - strand, within GFF808 at 864.942 kb on + strand, within GFF808 at 864.943 kb on - strand, within GFF808 at 864.943 kb on - strand, within GFF808 at 865.003 kb on - strand, within GFF808 at 865.219 kb on - strand, within GFF808 at 865.219 kb on - strand, within GFF808 at 865.318 kb on - strand at 865.318 kb on - strand at 865.318 kb on - strand at 865.740 kb on - strand at 865.769 kb on + strand at 865.770 kb on - strand at 865.770 kb on - strand at 865.832 kb on + strand, within GFF810 at 865.854 kb on - strand, within GFF810 at 865.854 kb on - strand, within GFF810 at 866.154 kb on - strand, within GFF810 at 866.318 kb on - strand, within GFF810 at 866.414 kb on + strand, within GFF810 at 866.414 kb on + strand, within GFF810 at 866.543 kb on + strand, within GFF810 at 866.557 kb on - strand, within GFF810 at 866.558 kb on + strand, within GFF810 at 866.711 kb on + strand, within GFF810 at 866.711 kb on + strand, within GFF810 at 866.841 kb on - strand, within GFF810 at 866.841 kb on - strand, within GFF810 at 866.852 kb on + strand, within GFF810 at 866.852 kb on + strand, within GFF810 at 866.853 kb on - strand, within GFF810 at 866.853 kb on - strand, within GFF810 at 866.853 kb on - strand, within GFF810 at 866.936 kb on + strand, within GFF810 at 867.149 kb on - strand at 867.442 kb on - strand, within GFF811 at 867.593 kb on + strand, within GFF811 at 867.593 kb on + strand, within GFF811 at 867.594 kb on - strand, within GFF811 at 867.648 kb on - strand, within GFF811 at 867.648 kb on - strand, within GFF811
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 864,747 + GFF808 0.52 +1.1 864,747 + GFF808 0.52 -0.2 864,747 + GFF808 0.52 +0.4 864,909 + GFF808 0.63 -0.6 864,910 - GFF808 0.63 -0.5 864,910 - GFF808 0.63 +1.6 864,910 - GFF808 0.63 +0.8 864,942 + GFF808 0.66 -0.5 864,943 - GFF808 0.66 +0.0 864,943 - GFF808 0.66 +0.1 865,003 - GFF808 0.70 +0.3 865,219 - GFF808 0.86 -0.0 865,219 - GFF808 0.86 -0.7 865,318 - +0.4 865,318 - +0.2 865,318 - +0.8 865,740 - -0.5 865,769 + -0.0 865,770 - +0.1 865,770 - -1.8 865,832 + GFF810 0.13 +0.2 865,854 - GFF810 0.14 -0.6 865,854 - GFF810 0.14 +1.4 866,154 - GFF810 0.35 -1.0 866,318 - GFF810 0.46 -0.3 866,414 + GFF810 0.53 +0.3 866,414 + GFF810 0.53 +0.3 866,543 + GFF810 0.62 -0.3 866,557 - GFF810 0.63 +0.4 866,558 + GFF810 0.63 -0.1 866,711 + GFF810 0.74 -1.4 866,711 + GFF810 0.74 +0.2 866,841 - GFF810 0.83 +0.5 866,841 - GFF810 0.83 +0.7 866,852 + GFF810 0.83 +0.0 866,852 + GFF810 0.83 -0.2 866,853 - GFF810 0.83 -0.1 866,853 - GFF810 0.83 +0.4 866,853 - GFF810 0.83 +0.6 866,936 + GFF810 0.89 +1.8 867,149 - -0.4 867,442 - GFF811 0.13 +0.5 867,593 + GFF811 0.22 -0.5 867,593 + GFF811 0.22 -0.5 867,594 - GFF811 0.22 -1.7 867,648 - GFF811 0.26 -0.0 867,648 - GFF811 0.26 +0.2
Or see this region's nucleotide sequence