Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF805 and GFF806 overlap by 26 nucleotides GFF806 and GFF807 overlap by 8 nucleotides GFF807 and GFF808 are separated by 121 nucleotides
GFF805 - Cysteine desulfurase, at 859,907 to 861,886
GFF805
GFF806 - Major membrane protein I, at 861,861 to 862,808
GFF806
GFF807 - hypothetical protein, at 862,801 to 863,913
GFF807
GFF808 - Dimethyl-sulfide monooxygenase, at 864,035 to 865,414
GFF808
Position (kb) 862
863
864 Strain fitness (log2 ratio) -2
-1
0
1
2 at 861.868 kb on + strand at 861.868 kb on + strand at 861.880 kb on + strand at 861.889 kb on + strand at 861.908 kb on - strand at 861.970 kb on + strand, within GFF806 at 861.970 kb on + strand, within GFF806 at 861.970 kb on + strand, within GFF806 at 861.971 kb on - strand, within GFF806 at 861.971 kb on - strand, within GFF806 at 862.126 kb on + strand, within GFF806 at 862.126 kb on + strand, within GFF806 at 862.126 kb on + strand, within GFF806 at 862.127 kb on - strand, within GFF806 at 862.127 kb on - strand, within GFF806 at 862.127 kb on - strand, within GFF806 at 862.127 kb on - strand, within GFF806 at 862.379 kb on - strand, within GFF806 at 862.391 kb on - strand, within GFF806 at 862.463 kb on - strand, within GFF806 at 862.474 kb on + strand, within GFF806 at 862.475 kb on - strand, within GFF806 at 862.531 kb on + strand, within GFF806 at 862.531 kb on + strand, within GFF806 at 862.532 kb on - strand, within GFF806 at 862.532 kb on - strand, within GFF806 at 862.552 kb on + strand, within GFF806 at 862.552 kb on + strand, within GFF806 at 862.552 kb on + strand, within GFF806 at 862.657 kb on + strand, within GFF806 at 862.657 kb on + strand, within GFF806 at 862.658 kb on - strand, within GFF806 at 863.013 kb on - strand, within GFF807 at 863.013 kb on - strand, within GFF807 at 863.118 kb on - strand, within GFF807 at 863.285 kb on + strand, within GFF807 at 863.285 kb on + strand, within GFF807 at 863.286 kb on - strand, within GFF807 at 863.286 kb on - strand, within GFF807 at 863.333 kb on + strand, within GFF807 at 863.573 kb on + strand, within GFF807 at 863.869 kb on + strand at 863.869 kb on + strand at 863.884 kb on + strand at 863.885 kb on - strand at 864.061 kb on - strand at 864.132 kb on + strand at 864.133 kb on - strand at 864.144 kb on + strand at 864.145 kb on - strand at 864.200 kb on - strand, within GFF808 at 864.200 kb on - strand, within GFF808 at 864.510 kb on + strand, within GFF808 at 864.510 kb on + strand, within GFF808 at 864.511 kb on - strand, within GFF808 at 864.747 kb on + strand, within GFF808 at 864.747 kb on + strand, within GFF808 at 864.747 kb on + strand, within GFF808 at 864.909 kb on + strand, within GFF808 at 864.910 kb on - strand, within GFF808 at 864.910 kb on - strand, within GFF808 at 864.910 kb on - strand, within GFF808
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 861,868 + +0.3 861,868 + +0.2 861,880 + -0.2 861,889 + +0.6 861,908 - -0.4 861,970 + GFF806 0.11 +0.8 861,970 + GFF806 0.11 -0.2 861,970 + GFF806 0.11 +0.3 861,971 - GFF806 0.12 +0.0 861,971 - GFF806 0.12 -0.7 862,126 + GFF806 0.28 +1.0 862,126 + GFF806 0.28 +1.3 862,126 + GFF806 0.28 -0.3 862,127 - GFF806 0.28 -0.5 862,127 - GFF806 0.28 +0.0 862,127 - GFF806 0.28 +0.7 862,127 - GFF806 0.28 +0.3 862,379 - GFF806 0.55 +0.2 862,391 - GFF806 0.56 +1.4 862,463 - GFF806 0.64 -1.6 862,474 + GFF806 0.65 -0.9 862,475 - GFF806 0.65 +2.5 862,531 + GFF806 0.71 +0.7 862,531 + GFF806 0.71 -0.4 862,532 - GFF806 0.71 +0.5 862,532 - GFF806 0.71 +0.2 862,552 + GFF806 0.73 +0.3 862,552 + GFF806 0.73 -0.3 862,552 + GFF806 0.73 -0.6 862,657 + GFF806 0.84 +0.5 862,657 + GFF806 0.84 +0.1 862,658 - GFF806 0.84 +0.2 863,013 - GFF807 0.19 -0.8 863,013 - GFF807 0.19 -1.3 863,118 - GFF807 0.28 -1.2 863,285 + GFF807 0.43 +0.9 863,285 + GFF807 0.43 -0.2 863,286 - GFF807 0.44 +0.6 863,286 - GFF807 0.44 -0.0 863,333 + GFF807 0.48 -0.3 863,573 + GFF807 0.69 +0.1 863,869 + +0.7 863,869 + -0.7 863,884 + +0.9 863,885 - -0.5 864,061 - -1.3 864,132 + -1.5 864,133 - +1.5 864,144 + +1.1 864,145 - -1.4 864,200 - GFF808 0.12 -2.3 864,200 - GFF808 0.12 -0.2 864,510 + GFF808 0.34 -2.0 864,510 + GFF808 0.34 -0.4 864,511 - GFF808 0.34 +0.2 864,747 + GFF808 0.52 +1.1 864,747 + GFF808 0.52 -0.2 864,747 + GFF808 0.52 +0.4 864,909 + GFF808 0.63 -0.6 864,910 - GFF808 0.63 -0.5 864,910 - GFF808 0.63 +1.6 864,910 - GFF808 0.63 +0.8
Or see this region's nucleotide sequence