Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF667 and GFF668 are separated by 25 nucleotides GFF668 and GFF669 are separated by 153 nucleotides
GFF667 - Alkyl hydroperoxide reductase subunit F, at 717,393 to 718,982
GFF667
GFF668 - Hydrogen peroxide-inducible genes activator, at 719,008 to 719,916
GFF668
GFF669 - Adaptive-response sensory-kinase SasA, at 720,070 to 721,647
GFF669
Position (kb) 719
720 Strain fitness (log2 ratio) -2
-1
0
1
2 at 718.081 kb on - strand, within GFF667 at 718.180 kb on - strand, within GFF667 at 718.230 kb on + strand, within GFF667 at 718.230 kb on + strand, within GFF667 at 718.231 kb on - strand, within GFF667 at 718.231 kb on - strand, within GFF667 at 718.414 kb on - strand, within GFF667 at 718.863 kb on + strand at 718.864 kb on - strand at 719.029 kb on + strand at 719.029 kb on + strand at 719.030 kb on - strand at 719.030 kb on - strand at 719.217 kb on + strand, within GFF668 at 719.217 kb on + strand, within GFF668 at 719.317 kb on + strand, within GFF668 at 719.318 kb on - strand, within GFF668 at 719.486 kb on + strand, within GFF668 at 719.486 kb on + strand, within GFF668 at 719.871 kb on + strand at 719.872 kb on - strand at 720.014 kb on + strand at 720.081 kb on + strand at 720.081 kb on + strand at 720.082 kb on - strand at 720.341 kb on - strand, within GFF669 at 720.344 kb on - strand, within GFF669 at 720.344 kb on - strand, within GFF669 at 720.344 kb on - strand, within GFF669 at 720.363 kb on - strand, within GFF669 at 720.490 kb on + strand, within GFF669 at 720.493 kb on + strand, within GFF669 at 720.493 kb on + strand, within GFF669 at 720.521 kb on - strand, within GFF669 at 720.521 kb on - strand, within GFF669 at 720.769 kb on + strand, within GFF669 at 720.769 kb on + strand, within GFF669 at 720.770 kb on - strand, within GFF669 at 720.770 kb on - strand, within GFF669 at 720.842 kb on - strand, within GFF669
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 718,081 - GFF667 0.43 -0.5 718,180 - GFF667 0.49 -0.1 718,230 + GFF667 0.53 +2.4 718,230 + GFF667 0.53 +1.2 718,231 - GFF667 0.53 -0.1 718,231 - GFF667 0.53 +0.1 718,414 - GFF667 0.64 +1.3 718,863 + -0.5 718,864 - -0.1 719,029 + -0.1 719,029 + -0.1 719,030 - +0.5 719,030 - +0.3 719,217 + GFF668 0.23 -0.2 719,217 + GFF668 0.23 -0.2 719,317 + GFF668 0.34 -0.1 719,318 - GFF668 0.34 +0.5 719,486 + GFF668 0.53 -0.4 719,486 + GFF668 0.53 -1.8 719,871 + -1.0 719,872 - -0.4 720,014 + +0.6 720,081 + -0.2 720,081 + -0.5 720,082 - -1.2 720,341 - GFF669 0.17 -1.3 720,344 - GFF669 0.17 -0.0 720,344 - GFF669 0.17 +1.3 720,344 - GFF669 0.17 +0.5 720,363 - GFF669 0.19 +0.2 720,490 + GFF669 0.27 +0.7 720,493 + GFF669 0.27 +0.7 720,493 + GFF669 0.27 +1.4 720,521 - GFF669 0.29 +0.4 720,521 - GFF669 0.29 -1.0 720,769 + GFF669 0.44 -0.8 720,769 + GFF669 0.44 +0.0 720,770 - GFF669 0.44 -0.6 720,770 - GFF669 0.44 +0.6 720,842 - GFF669 0.49 -2.4
Or see this region's nucleotide sequence