Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF518 and GFF519 are separated by 191 nucleotides GFF519 and GFF520 are separated by 364 nucleotides GFF520 and GFF521 are separated by 186 nucleotides
GFF518 - 3-ketoacyl-CoA thiolase, at 554,881 to 556,038
GFF518
GFF519 - HTH-type transcriptional regulator CueR, at 556,230 to 556,670
GFF519
GFF520 - Long-chain fatty acid transport protein, at 557,035 to 558,387
GFF520
GFF521 - Long-chain-fatty-acid--CoA ligase, at 558,574 to 560,226
GFF521
Position (kb) 557
558
559 Strain fitness (log2 ratio) -2
-1
0
1 at 556.129 kb on - strand at 556.297 kb on + strand, within GFF519 at 556.418 kb on - strand, within GFF519 at 556.430 kb on - strand, within GFF519 at 556.430 kb on - strand, within GFF519 at 556.706 kb on + strand at 556.707 kb on - strand at 556.707 kb on - strand at 556.961 kb on + strand at 556.962 kb on - strand at 556.983 kb on + strand at 557.020 kb on + strand at 557.021 kb on - strand at 557.021 kb on - strand at 557.182 kb on + strand, within GFF520 at 557.182 kb on + strand, within GFF520 at 557.302 kb on + strand, within GFF520 at 557.302 kb on + strand, within GFF520 at 557.303 kb on - strand, within GFF520 at 557.303 kb on - strand, within GFF520 at 557.428 kb on + strand, within GFF520 at 557.429 kb on - strand, within GFF520 at 557.429 kb on - strand, within GFF520 at 557.429 kb on - strand, within GFF520 at 557.429 kb on - strand, within GFF520 at 557.429 kb on - strand, within GFF520 at 557.429 kb on - strand, within GFF520 at 557.429 kb on - strand, within GFF520 at 557.481 kb on - strand, within GFF520 at 557.481 kb on - strand, within GFF520 at 557.481 kb on - strand, within GFF520 at 557.484 kb on + strand, within GFF520 at 557.618 kb on - strand, within GFF520 at 557.680 kb on + strand, within GFF520 at 557.681 kb on - strand, within GFF520 at 557.770 kb on + strand, within GFF520 at 557.770 kb on + strand, within GFF520 at 557.771 kb on - strand, within GFF520 at 557.983 kb on + strand, within GFF520 at 557.984 kb on - strand, within GFF520 at 558.052 kb on + strand, within GFF520 at 558.052 kb on + strand, within GFF520 at 558.088 kb on - strand, within GFF520 at 558.094 kb on + strand, within GFF520 at 558.095 kb on - strand, within GFF520 at 558.178 kb on + strand, within GFF520 at 558.179 kb on - strand, within GFF520 at 558.215 kb on - strand, within GFF520 at 558.313 kb on + strand at 558.314 kb on - strand at 558.343 kb on + strand at 558.344 kb on - strand at 558.385 kb on + strand at 558.386 kb on - strand at 558.386 kb on - strand at 558.437 kb on + strand at 558.694 kb on + strand at 558.695 kb on - strand at 558.695 kb on - strand at 558.695 kb on - strand at 558.797 kb on - strand, within GFF521 at 559.069 kb on + strand, within GFF521 at 559.069 kb on + strand, within GFF521 at 559.069 kb on + strand, within GFF521 at 559.100 kb on - strand, within GFF521 at 559.100 kb on - strand, within GFF521 at 559.100 kb on - strand, within GFF521 at 559.177 kb on + strand, within GFF521 at 559.177 kb on + strand, within GFF521 at 559.177 kb on + strand, within GFF521 at 559.178 kb on - strand, within GFF521 at 559.178 kb on - strand, within GFF521 at 559.178 kb on - strand, within GFF521 at 559.179 kb on + strand, within GFF521
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 556,129 - +0.2 556,297 + GFF519 0.15 +0.2 556,418 - GFF519 0.43 -0.5 556,430 - GFF519 0.45 +0.0 556,430 - GFF519 0.45 +0.4 556,706 + -0.7 556,707 - -0.2 556,707 - +0.3 556,961 + +0.3 556,962 - -0.3 556,983 + +0.1 557,020 + +0.5 557,021 - +0.7 557,021 - -0.4 557,182 + GFF520 0.11 +0.6 557,182 + GFF520 0.11 -1.5 557,302 + GFF520 0.20 -0.4 557,302 + GFF520 0.20 -1.1 557,303 - GFF520 0.20 -0.6 557,303 - GFF520 0.20 -2.1 557,428 + GFF520 0.29 -0.0 557,429 - GFF520 0.29 +0.9 557,429 - GFF520 0.29 -1.0 557,429 - GFF520 0.29 -0.8 557,429 - GFF520 0.29 -1.1 557,429 - GFF520 0.29 -0.2 557,429 - GFF520 0.29 +0.0 557,429 - GFF520 0.29 -0.5 557,481 - GFF520 0.33 -0.1 557,481 - GFF520 0.33 +0.3 557,481 - GFF520 0.33 +1.4 557,484 + GFF520 0.33 -1.1 557,618 - GFF520 0.43 -0.8 557,680 + GFF520 0.48 +0.3 557,681 - GFF520 0.48 -0.3 557,770 + GFF520 0.54 -1.1 557,770 + GFF520 0.54 -2.4 557,771 - GFF520 0.54 -2.3 557,983 + GFF520 0.70 -0.8 557,984 - GFF520 0.70 -1.5 558,052 + GFF520 0.75 -0.2 558,052 + GFF520 0.75 +0.8 558,088 - GFF520 0.78 -0.7 558,094 + GFF520 0.78 +1.5 558,095 - GFF520 0.78 -0.4 558,178 + GFF520 0.84 +0.2 558,179 - GFF520 0.85 -0.7 558,215 - GFF520 0.87 -0.5 558,313 + +0.1 558,314 - -0.1 558,343 + -0.6 558,344 - -0.6 558,385 + +0.5 558,386 - +0.5 558,386 - +0.7 558,437 + -0.9 558,694 + -0.9 558,695 - -1.2 558,695 - -1.9 558,695 - +0.2 558,797 - GFF521 0.13 +0.7 559,069 + GFF521 0.30 -1.1 559,069 + GFF521 0.30 -0.8 559,069 + GFF521 0.30 +0.7 559,100 - GFF521 0.32 -1.9 559,100 - GFF521 0.32 +0.4 559,100 - GFF521 0.32 +0.2 559,177 + GFF521 0.36 -0.6 559,177 + GFF521 0.36 +0.3 559,177 + GFF521 0.36 +0.0 559,178 - GFF521 0.37 -0.7 559,178 - GFF521 0.37 -0.1 559,178 - GFF521 0.37 +0.3 559,179 + GFF521 0.37 -0.3
Or see this region's nucleotide sequence