Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4757 and GFF4758 are separated by 2 nucleotides GFF4758 and GFF4759 are separated by 133 nucleotides
GFF4757 - hypothetical protein, at 169,985 to 171,031
GFF4757
GFF4758 - Vitamin B12 import ATP-binding protein BtuD, at 171,034 to 172,140
GFF4758
GFF4759 - HTH-type transcriptional regulator HdfR, at 172,274 to 173,221
GFF4759
Position (kb) 171
172
173 Strain fitness (log2 ratio) -2
-1
0
1
2 at 170.118 kb on + strand, within GFF4757 at 170.205 kb on + strand, within GFF4757 at 170.205 kb on + strand, within GFF4757 at 170.205 kb on + strand, within GFF4757 at 170.205 kb on + strand, within GFF4757 at 170.205 kb on + strand, within GFF4757 at 170.206 kb on - strand, within GFF4757 at 170.206 kb on - strand, within GFF4757 at 170.206 kb on - strand, within GFF4757 at 170.206 kb on - strand, within GFF4757 at 170.206 kb on - strand, within GFF4757 at 170.206 kb on - strand, within GFF4757 at 170.206 kb on - strand, within GFF4757 at 170.206 kb on - strand, within GFF4757 at 170.211 kb on + strand, within GFF4757 at 170.212 kb on - strand, within GFF4757 at 170.212 kb on - strand, within GFF4757 at 170.553 kb on + strand, within GFF4757 at 170.553 kb on + strand, within GFF4757 at 170.554 kb on - strand, within GFF4757 at 170.554 kb on - strand, within GFF4757 at 170.613 kb on + strand, within GFF4757 at 170.614 kb on - strand, within GFF4757 at 170.652 kb on + strand, within GFF4757 at 170.709 kb on + strand, within GFF4757 at 170.709 kb on + strand, within GFF4757 at 170.709 kb on + strand, within GFF4757 at 170.874 kb on + strand, within GFF4757 at 170.875 kb on - strand, within GFF4757 at 170.875 kb on - strand, within GFF4757 at 170.875 kb on - strand, within GFF4757 at 171.192 kb on - strand, within GFF4758 at 171.461 kb on + strand, within GFF4758 at 171.461 kb on + strand, within GFF4758 at 171.462 kb on - strand, within GFF4758 at 171.568 kb on - strand, within GFF4758 at 171.833 kb on + strand, within GFF4758 at 171.858 kb on + strand, within GFF4758 at 171.858 kb on + strand, within GFF4758 at 171.858 kb on + strand, within GFF4758 at 171.858 kb on + strand, within GFF4758 at 171.859 kb on - strand, within GFF4758 at 171.875 kb on + strand, within GFF4758 at 171.876 kb on - strand, within GFF4758 at 171.876 kb on - strand, within GFF4758 at 172.239 kb on - strand at 172.262 kb on - strand at 172.308 kb on - strand at 172.893 kb on - strand, within GFF4759 at 172.991 kb on + strand, within GFF4759 at 172.992 kb on - strand, within GFF4759
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 170,118 + GFF4757 0.13 +0.2 170,205 + GFF4757 0.21 -1.2 170,205 + GFF4757 0.21 -0.4 170,205 + GFF4757 0.21 +0.7 170,205 + GFF4757 0.21 +0.1 170,205 + GFF4757 0.21 -1.2 170,206 - GFF4757 0.21 +0.4 170,206 - GFF4757 0.21 -1.0 170,206 - GFF4757 0.21 +0.3 170,206 - GFF4757 0.21 +0.6 170,206 - GFF4757 0.21 -0.3 170,206 - GFF4757 0.21 -1.4 170,206 - GFF4757 0.21 +0.2 170,206 - GFF4757 0.21 -0.1 170,211 + GFF4757 0.22 -0.3 170,212 - GFF4757 0.22 -0.4 170,212 - GFF4757 0.22 +1.2 170,553 + GFF4757 0.54 +0.2 170,553 + GFF4757 0.54 +0.8 170,554 - GFF4757 0.54 -0.7 170,554 - GFF4757 0.54 -2.0 170,613 + GFF4757 0.60 +0.6 170,614 - GFF4757 0.60 +0.3 170,652 + GFF4757 0.64 +0.3 170,709 + GFF4757 0.69 -0.2 170,709 + GFF4757 0.69 -0.6 170,709 + GFF4757 0.69 -0.6 170,874 + GFF4757 0.85 +0.5 170,875 - GFF4757 0.85 -0.9 170,875 - GFF4757 0.85 +1.2 170,875 - GFF4757 0.85 +0.2 171,192 - GFF4758 0.14 -0.2 171,461 + GFF4758 0.39 -0.9 171,461 + GFF4758 0.39 +0.2 171,462 - GFF4758 0.39 -0.4 171,568 - GFF4758 0.48 +0.4 171,833 + GFF4758 0.72 -0.3 171,858 + GFF4758 0.74 -0.6 171,858 + GFF4758 0.74 +1.3 171,858 + GFF4758 0.74 +0.4 171,858 + GFF4758 0.74 +0.2 171,859 - GFF4758 0.75 -0.5 171,875 + GFF4758 0.76 -0.4 171,876 - GFF4758 0.76 -0.1 171,876 - GFF4758 0.76 -0.2 172,239 - -0.2 172,262 - +2.1 172,308 - +0.4 172,893 - GFF4759 0.65 +0.6 172,991 + GFF4759 0.76 -0.6 172,992 - GFF4759 0.76 +0.1
Or see this region's nucleotide sequence