Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4399 and GFF4400 are separated by 121 nucleotides GFF4400 and GFF4401 are separated by 24 nucleotides
GFF4399 - hypothetical protein, at 202,821 to 205,457
GFF4399
GFF4400 - hypothetical protein, at 205,579 to 206,118
GFF4400
GFF4401 - hypothetical protein, at 206,143 to 207,087
GFF4401
Position (kb) 205
206
207 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 204.658 kb on - strand, within GFF4399 at 204.658 kb on - strand, within GFF4399 at 204.658 kb on - strand, within GFF4399 at 204.746 kb on - strand, within GFF4399 at 204.746 kb on - strand, within GFF4399 at 204.786 kb on + strand, within GFF4399 at 204.787 kb on - strand, within GFF4399 at 204.787 kb on - strand, within GFF4399 at 204.787 kb on - strand, within GFF4399 at 204.787 kb on - strand, within GFF4399 at 204.993 kb on + strand, within GFF4399 at 204.994 kb on - strand, within GFF4399 at 205.146 kb on + strand, within GFF4399 at 205.146 kb on + strand, within GFF4399 at 205.146 kb on + strand, within GFF4399 at 205.147 kb on - strand, within GFF4399 at 205.147 kb on - strand, within GFF4399 at 205.147 kb on - strand, within GFF4399 at 205.147 kb on - strand, within GFF4399 at 205.239 kb on - strand at 205.302 kb on + strand at 205.303 kb on - strand at 205.303 kb on - strand at 205.303 kb on - strand at 205.303 kb on - strand at 205.455 kb on + strand at 205.456 kb on - strand at 205.456 kb on - strand at 205.456 kb on - strand at 205.690 kb on + strand, within GFF4400 at 205.691 kb on - strand, within GFF4400 at 205.691 kb on - strand, within GFF4400 at 205.713 kb on + strand, within GFF4400 at 205.713 kb on + strand, within GFF4400 at 205.714 kb on - strand, within GFF4400 at 205.945 kb on + strand, within GFF4400 at 205.946 kb on - strand, within GFF4400 at 206.065 kb on + strand at 206.065 kb on + strand at 206.065 kb on + strand at 206.065 kb on + strand at 206.066 kb on - strand at 206.066 kb on - strand at 206.066 kb on - strand at 206.066 kb on - strand at 206.074 kb on + strand at 206.075 kb on - strand at 206.075 kb on - strand at 206.174 kb on + strand at 206.382 kb on + strand, within GFF4401 at 206.382 kb on + strand, within GFF4401 at 206.382 kb on + strand, within GFF4401 at 206.382 kb on + strand, within GFF4401 at 206.383 kb on - strand, within GFF4401 at 206.384 kb on + strand, within GFF4401 at 206.385 kb on - strand, within GFF4401 at 206.410 kb on - strand, within GFF4401 at 206.426 kb on + strand, within GFF4401 at 206.426 kb on + strand, within GFF4401 at 206.435 kb on + strand, within GFF4401 at 206.531 kb on + strand, within GFF4401 at 206.532 kb on - strand, within GFF4401 at 206.532 kb on - strand, within GFF4401 at 206.942 kb on - strand, within GFF4401 at 207.005 kb on + strand at 207.006 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 204,658 - GFF4399 0.70 -0.0 204,658 - GFF4399 0.70 -0.8 204,658 - GFF4399 0.70 +0.3 204,746 - GFF4399 0.73 -1.4 204,746 - GFF4399 0.73 -2.1 204,786 + GFF4399 0.75 -0.5 204,787 - GFF4399 0.75 -0.6 204,787 - GFF4399 0.75 +0.5 204,787 - GFF4399 0.75 -0.7 204,787 - GFF4399 0.75 +0.1 204,993 + GFF4399 0.82 -0.1 204,994 - GFF4399 0.82 -0.8 205,146 + GFF4399 0.88 -1.2 205,146 + GFF4399 0.88 +0.1 205,146 + GFF4399 0.88 -0.7 205,147 - GFF4399 0.88 +0.1 205,147 - GFF4399 0.88 -0.3 205,147 - GFF4399 0.88 -0.6 205,147 - GFF4399 0.88 -1.2 205,239 - -1.0 205,302 + +0.7 205,303 - -0.4 205,303 - -1.2 205,303 - -2.2 205,303 - -0.5 205,455 + +0.2 205,456 - -0.7 205,456 - +0.7 205,456 - +0.8 205,690 + GFF4400 0.21 +0.3 205,691 - GFF4400 0.21 -1.0 205,691 - GFF4400 0.21 -0.9 205,713 + GFF4400 0.25 +0.1 205,713 + GFF4400 0.25 -1.0 205,714 - GFF4400 0.25 -0.1 205,945 + GFF4400 0.68 +0.6 205,946 - GFF4400 0.68 +0.3 206,065 + +1.4 206,065 + -0.3 206,065 + -0.4 206,065 + -0.1 206,066 - -0.3 206,066 - -0.4 206,066 - -0.2 206,066 - +1.6 206,074 + +0.1 206,075 - +0.2 206,075 - +0.8 206,174 + -0.0 206,382 + GFF4401 0.25 -0.5 206,382 + GFF4401 0.25 -0.2 206,382 + GFF4401 0.25 +1.9 206,382 + GFF4401 0.25 -0.4 206,383 - GFF4401 0.25 +1.4 206,384 + GFF4401 0.26 +0.2 206,385 - GFF4401 0.26 -0.2 206,410 - GFF4401 0.28 +0.5 206,426 + GFF4401 0.30 -0.5 206,426 + GFF4401 0.30 -0.5 206,435 + GFF4401 0.31 +0.3 206,531 + GFF4401 0.41 -2.9 206,532 - GFF4401 0.41 -0.6 206,532 - GFF4401 0.41 +0.0 206,942 - GFF4401 0.85 +0.0 207,005 + -0.1 207,006 - -0.5
Or see this region's nucleotide sequence