Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4305 and GFF4306 are separated by 439 nucleotides GFF4306 and GFF4307 are separated by 100 nucleotides
GFF4305 - High-affinity branched-chain amino acid transport system permease protein LivH, at 84,610 to 85,482
GFF4305
GFF4306 - hypothetical protein, at 85,922 to 87,628
GFF4306
GFF4307 - hypothetical protein, at 87,729 to 88,640
GFF4307
Position (kb) 85
86
87
88 Strain fitness (log2 ratio) -2
-1
0
1 at 85.019 kb on + strand, within GFF4305 at 85.019 kb on + strand, within GFF4305 at 85.020 kb on - strand, within GFF4305 at 85.020 kb on - strand, within GFF4305 at 85.020 kb on - strand, within GFF4305 at 85.151 kb on + strand, within GFF4305 at 85.152 kb on - strand, within GFF4305 at 85.436 kb on + strand at 85.436 kb on + strand at 85.436 kb on + strand at 85.436 kb on + strand at 85.436 kb on + strand at 85.436 kb on + strand at 85.437 kb on - strand at 85.437 kb on - strand at 85.437 kb on - strand at 85.675 kb on + strand at 86.185 kb on + strand, within GFF4306 at 86.207 kb on + strand, within GFF4306 at 86.207 kb on + strand, within GFF4306 at 86.208 kb on - strand, within GFF4306 at 86.208 kb on - strand, within GFF4306 at 86.273 kb on + strand, within GFF4306 at 86.274 kb on - strand, within GFF4306 at 86.274 kb on - strand, within GFF4306 at 86.274 kb on - strand, within GFF4306 at 86.294 kb on + strand, within GFF4306 at 86.294 kb on + strand, within GFF4306 at 86.496 kb on - strand, within GFF4306 at 86.900 kb on + strand, within GFF4306 at 86.900 kb on + strand, within GFF4306 at 86.900 kb on + strand, within GFF4306 at 87.078 kb on - strand, within GFF4306 at 87.225 kb on - strand, within GFF4306 at 87.225 kb on - strand, within GFF4306 at 87.294 kb on - strand, within GFF4306 at 87.380 kb on + strand, within GFF4306 at 87.381 kb on - strand, within GFF4306 at 87.540 kb on - strand at 87.640 kb on + strand at 88.576 kb on + strand at 88.576 kb on + strand at 88.577 kb on - strand at 88.577 kb on - strand at 88.577 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 85,019 + GFF4305 0.47 -0.5 85,019 + GFF4305 0.47 +1.2 85,020 - GFF4305 0.47 -0.1 85,020 - GFF4305 0.47 -0.2 85,020 - GFF4305 0.47 +0.1 85,151 + GFF4305 0.62 +1.0 85,152 - GFF4305 0.62 -1.1 85,436 + -0.6 85,436 + +1.1 85,436 + +0.1 85,436 + -0.4 85,436 + +0.3 85,436 + -0.2 85,437 - -0.2 85,437 - -0.6 85,437 - +0.8 85,675 + +0.7 86,185 + GFF4306 0.15 +0.5 86,207 + GFF4306 0.17 -2.3 86,207 + GFF4306 0.17 -0.4 86,208 - GFF4306 0.17 +0.4 86,208 - GFF4306 0.17 -0.5 86,273 + GFF4306 0.21 -0.5 86,274 - GFF4306 0.21 -0.1 86,274 - GFF4306 0.21 +0.1 86,274 - GFF4306 0.21 -0.8 86,294 + GFF4306 0.22 +0.1 86,294 + GFF4306 0.22 +0.5 86,496 - GFF4306 0.34 -0.8 86,900 + GFF4306 0.57 +0.4 86,900 + GFF4306 0.57 -0.0 86,900 + GFF4306 0.57 +0.8 87,078 - GFF4306 0.68 +0.5 87,225 - GFF4306 0.76 +1.0 87,225 - GFF4306 0.76 +0.3 87,294 - GFF4306 0.80 -0.2 87,380 + GFF4306 0.85 +0.0 87,381 - GFF4306 0.85 -1.0 87,540 - +0.8 87,640 + -2.2 88,576 + +0.3 88,576 + +0.5 88,577 - -0.7 88,577 - -0.1 88,577 - -0.4
Or see this region's nucleotide sequence