Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4168 and GFF4169 are separated by 21 nucleotides GFF4169 and GFF4170 are separated by 110 nucleotides GFF4170 and GFF4171 are separated by 11 nucleotides
GFF4168 - Glycerol kinase, at 181,134 to 182,621
GFF4168
GFF4169 - D-erythritol 1-phosphate dehydrogenase, at 182,643 to 184,151
GFF4169
GFF4170 - Dihydroanticapsin 7-dehydrogenase, at 184,262 to 185,017
GFF4170
GFF4171 - 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase, at 185,029 to 185,790
GFF4171
Position (kb) 182
183
184
185 Strain fitness (log2 ratio) -2
-1
0
1 at 181.708 kb on + strand, within GFF4168 at 181.729 kb on + strand, within GFF4168 at 181.729 kb on + strand, within GFF4168 at 181.729 kb on + strand, within GFF4168 at 181.730 kb on - strand, within GFF4168 at 181.730 kb on - strand, within GFF4168 at 181.730 kb on - strand, within GFF4168 at 181.754 kb on - strand, within GFF4168 at 181.834 kb on + strand, within GFF4168 at 182.113 kb on + strand, within GFF4168 at 182.222 kb on - strand, within GFF4168 at 182.222 kb on - strand, within GFF4168 at 182.222 kb on - strand, within GFF4168 at 182.417 kb on + strand, within GFF4168 at 182.611 kb on + strand at 182.611 kb on + strand at 182.611 kb on + strand at 182.665 kb on + strand at 182.665 kb on + strand at 182.770 kb on + strand at 182.770 kb on + strand at 182.770 kb on + strand at 182.866 kb on + strand, within GFF4169 at 182.944 kb on + strand, within GFF4169 at 183.130 kb on + strand, within GFF4169 at 183.130 kb on + strand, within GFF4169 at 183.130 kb on + strand, within GFF4169 at 183.131 kb on - strand, within GFF4169 at 183.131 kb on - strand, within GFF4169 at 183.236 kb on - strand, within GFF4169 at 183.259 kb on + strand, within GFF4169 at 183.259 kb on + strand, within GFF4169 at 183.260 kb on - strand, within GFF4169 at 183.394 kb on + strand, within GFF4169 at 183.394 kb on + strand, within GFF4169 at 183.394 kb on + strand, within GFF4169 at 183.394 kb on + strand, within GFF4169 at 183.395 kb on - strand, within GFF4169 at 183.395 kb on - strand, within GFF4169 at 183.413 kb on - strand, within GFF4169 at 183.709 kb on + strand, within GFF4169 at 183.728 kb on - strand, within GFF4169 at 183.810 kb on - strand, within GFF4169 at 183.817 kb on + strand, within GFF4169 at 183.965 kb on - strand, within GFF4169 at 183.965 kb on - strand, within GFF4169 at 183.977 kb on - strand, within GFF4169 at 184.326 kb on + strand at 184.326 kb on + strand at 184.327 kb on - strand at 184.769 kb on + strand, within GFF4170 at 184.769 kb on + strand, within GFF4170 at 184.769 kb on + strand, within GFF4170 at 184.841 kb on - strand, within GFF4170 at 185.093 kb on + strand at 185.093 kb on + strand at 185.093 kb on + strand at 185.094 kb on - strand at 185.094 kb on - strand at 185.126 kb on - strand, within GFF4171
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 181,708 + GFF4168 0.39 -0.5 181,729 + GFF4168 0.40 +0.9 181,729 + GFF4168 0.40 +0.2 181,729 + GFF4168 0.40 -0.1 181,730 - GFF4168 0.40 -0.9 181,730 - GFF4168 0.40 -0.7 181,730 - GFF4168 0.40 -1.2 181,754 - GFF4168 0.42 -0.7 181,834 + GFF4168 0.47 -0.6 182,113 + GFF4168 0.66 +1.2 182,222 - GFF4168 0.73 -0.5 182,222 - GFF4168 0.73 +0.3 182,222 - GFF4168 0.73 -0.6 182,417 + GFF4168 0.86 -2.2 182,611 + +0.2 182,611 + +0.5 182,611 + -1.4 182,665 + +0.5 182,665 + -0.4 182,770 + -0.6 182,770 + -0.3 182,770 + +0.1 182,866 + GFF4169 0.15 -0.1 182,944 + GFF4169 0.20 +0.1 183,130 + GFF4169 0.32 +1.6 183,130 + GFF4169 0.32 +0.9 183,130 + GFF4169 0.32 +0.5 183,131 - GFF4169 0.32 +0.1 183,131 - GFF4169 0.32 -0.2 183,236 - GFF4169 0.39 +0.7 183,259 + GFF4169 0.41 -0.4 183,259 + GFF4169 0.41 -0.5 183,260 - GFF4169 0.41 -0.1 183,394 + GFF4169 0.50 +0.1 183,394 + GFF4169 0.50 -1.2 183,394 + GFF4169 0.50 +0.7 183,394 + GFF4169 0.50 -0.1 183,395 - GFF4169 0.50 +0.7 183,395 - GFF4169 0.50 +1.1 183,413 - GFF4169 0.51 +0.9 183,709 + GFF4169 0.71 -0.8 183,728 - GFF4169 0.72 +0.2 183,810 - GFF4169 0.77 +0.4 183,817 + GFF4169 0.78 +0.0 183,965 - GFF4169 0.88 +0.5 183,965 - GFF4169 0.88 +0.5 183,977 - GFF4169 0.88 -0.1 184,326 + +1.6 184,326 + +1.5 184,327 - +1.3 184,769 + GFF4170 0.67 -0.4 184,769 + GFF4170 0.67 +0.8 184,769 + GFF4170 0.67 +1.4 184,841 - GFF4170 0.77 -0.2 185,093 + -0.3 185,093 + -0.6 185,093 + +0.1 185,094 - -1.8 185,094 - +1.1 185,126 - GFF4171 0.13 +0.9
Or see this region's nucleotide sequence