Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4151 and GFF4152 overlap by 4 nucleotides GFF4152 and GFF4153 are separated by 102 nucleotides GFF4153 and GFF4154 are separated by 159 nucleotides
GFF4151 - Nickel and cobalt resistance protein CnrA, at 162,588 to 165,737
GFF4151
GFF4152 - Multidrug resistance protein MdtE, at 165,734 to 166,966
GFF4152
GFF4153 - hypothetical protein, at 167,069 to 167,686
GFF4153
GFF4154 - hypothetical protein, at 167,846 to 168,931
GFF4154
Position (kb) 165
166
167 Strain fitness (log2 ratio) -2
-1
0
1 at 165.005 kb on + strand, within GFF4151 at 165.072 kb on - strand, within GFF4151 at 165.113 kb on - strand, within GFF4151 at 165.113 kb on - strand, within GFF4151 at 165.113 kb on - strand, within GFF4151 at 165.242 kb on - strand, within GFF4151 at 165.242 kb on - strand, within GFF4151 at 165.253 kb on + strand, within GFF4151 at 165.253 kb on + strand, within GFF4151 at 165.254 kb on - strand, within GFF4151 at 165.265 kb on + strand, within GFF4151 at 165.266 kb on - strand, within GFF4151 at 165.343 kb on + strand, within GFF4151 at 165.344 kb on - strand, within GFF4151 at 165.583 kb on + strand at 165.583 kb on + strand at 165.583 kb on + strand at 165.590 kb on - strand at 165.590 kb on - strand at 165.590 kb on - strand at 165.590 kb on - strand at 165.941 kb on - strand, within GFF4152 at 165.941 kb on - strand, within GFF4152 at 165.942 kb on + strand, within GFF4152 at 165.943 kb on - strand, within GFF4152 at 165.943 kb on - strand, within GFF4152 at 166.146 kb on + strand, within GFF4152 at 166.146 kb on + strand, within GFF4152 at 167.006 kb on - strand at 167.037 kb on + strand at 167.098 kb on + strand at 167.099 kb on - strand at 167.156 kb on - strand, within GFF4153 at 167.410 kb on - strand, within GFF4153 at 167.410 kb on - strand, within GFF4153 at 167.538 kb on + strand, within GFF4153 at 167.538 kb on + strand, within GFF4153 at 167.767 kb on + strand at 167.842 kb on + strand at 167.843 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 165,005 + GFF4151 0.77 -1.0 165,072 - GFF4151 0.79 +1.2 165,113 - GFF4151 0.80 -1.1 165,113 - GFF4151 0.80 -0.1 165,113 - GFF4151 0.80 -0.2 165,242 - GFF4151 0.84 +0.6 165,242 - GFF4151 0.84 +0.4 165,253 + GFF4151 0.85 -0.0 165,253 + GFF4151 0.85 +0.1 165,254 - GFF4151 0.85 -0.4 165,265 + GFF4151 0.85 -1.5 165,266 - GFF4151 0.85 +1.1 165,343 + GFF4151 0.87 -0.0 165,344 - GFF4151 0.87 -1.9 165,583 + +0.1 165,583 + +0.5 165,583 + +0.3 165,590 - +0.0 165,590 - +0.0 165,590 - +0.7 165,590 - -0.1 165,941 - GFF4152 0.17 +0.9 165,941 - GFF4152 0.17 +0.6 165,942 + GFF4152 0.17 -1.5 165,943 - GFF4152 0.17 -0.2 165,943 - GFF4152 0.17 -0.0 166,146 + GFF4152 0.33 -0.4 166,146 + GFF4152 0.33 -1.2 167,006 - -0.3 167,037 + -0.4 167,098 + -0.5 167,099 - -0.1 167,156 - GFF4153 0.14 -1.2 167,410 - GFF4153 0.55 -0.6 167,410 - GFF4153 0.55 +0.1 167,538 + GFF4153 0.76 -1.6 167,538 + GFF4153 0.76 +0.6 167,767 + -0.6 167,842 + +1.3 167,843 - +0.3
Or see this region's nucleotide sequence