Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF383 and GFF384 are separated by 79 nucleotides GFF384 and GFF385 are separated by 124 nucleotides GFF385 and GFF386 are separated by 64 nucleotides GFF386 and GFF387 are separated by 12 nucleotides
GFF383 - Peptidyl-prolyl cis-trans isomerase B, at 395,232 to 395,690
GFF383
GFF384 - Proteasome subunit beta, at 395,770 to 396,540
GFF384
GFF385 - hypothetical protein, at 396,665 to 397,837
GFF385
GFF386 - hypothetical protein, at 397,902 to 398,651
GFF386
GFF387 - hypothetical protein, at 398,664 to 399,128
GFF387
Position (kb) 396
397
398 Strain fitness (log2 ratio) -1
0
1
2 at 395.759 kb on - strand at 395.759 kb on - strand at 395.810 kb on + strand at 395.883 kb on - strand, within GFF384 at 395.906 kb on + strand, within GFF384 at 396.041 kb on + strand, within GFF384 at 396.074 kb on + strand, within GFF384 at 396.075 kb on - strand, within GFF384 at 396.150 kb on - strand, within GFF384 at 396.150 kb on - strand, within GFF384 at 396.533 kb on + strand at 396.533 kb on + strand at 396.533 kb on + strand at 396.533 kb on + strand at 396.534 kb on - strand at 396.534 kb on - strand at 396.534 kb on - strand at 396.534 kb on - strand at 396.534 kb on - strand at 396.569 kb on + strand at 396.569 kb on + strand at 396.570 kb on - strand at 396.571 kb on + strand at 396.571 kb on + strand at 396.572 kb on - strand at 396.572 kb on - strand at 396.572 kb on - strand at 396.760 kb on - strand at 396.760 kb on - strand at 396.798 kb on + strand, within GFF385 at 396.799 kb on - strand, within GFF385 at 396.799 kb on - strand, within GFF385 at 396.810 kb on + strand, within GFF385 at 396.828 kb on + strand, within GFF385 at 396.915 kb on + strand, within GFF385 at 396.972 kb on + strand, within GFF385 at 396.972 kb on + strand, within GFF385 at 397.014 kb on + strand, within GFF385 at 397.014 kb on + strand, within GFF385 at 397.015 kb on - strand, within GFF385 at 397.015 kb on - strand, within GFF385 at 397.098 kb on + strand, within GFF385 at 397.099 kb on - strand, within GFF385 at 397.134 kb on + strand, within GFF385 at 397.135 kb on - strand, within GFF385 at 397.281 kb on + strand, within GFF385 at 397.282 kb on - strand, within GFF385 at 397.471 kb on - strand, within GFF385 at 397.553 kb on - strand, within GFF385 at 397.553 kb on - strand, within GFF385 at 397.553 kb on - strand, within GFF385 at 397.554 kb on + strand, within GFF385 at 397.554 kb on + strand, within GFF385 at 397.554 kb on + strand, within GFF385 at 397.554 kb on + strand, within GFF385 at 397.584 kb on + strand, within GFF385 at 397.584 kb on + strand, within GFF385 at 397.584 kb on + strand, within GFF385 at 397.585 kb on - strand, within GFF385 at 397.585 kb on - strand, within GFF385 at 397.611 kb on + strand, within GFF385 at 397.844 kb on + strand at 398.056 kb on + strand, within GFF386 at 398.056 kb on + strand, within GFF386 at 398.056 kb on + strand, within GFF386 at 398.056 kb on + strand, within GFF386 at 398.057 kb on - strand, within GFF386 at 398.152 kb on + strand, within GFF386 at 398.152 kb on + strand, within GFF386 at 398.152 kb on + strand, within GFF386 at 398.534 kb on - strand, within GFF386 at 398.534 kb on - strand, within GFF386
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 395,759 - +1.0 395,759 - +0.3 395,810 + +1.9 395,883 - GFF384 0.15 -0.8 395,906 + GFF384 0.18 -1.6 396,041 + GFF384 0.35 -1.5 396,074 + GFF384 0.39 -0.4 396,075 - GFF384 0.40 -0.0 396,150 - GFF384 0.49 -1.4 396,150 - GFF384 0.49 +0.4 396,533 + +0.1 396,533 + -0.3 396,533 + +1.1 396,533 + -0.2 396,534 - +0.3 396,534 - +0.1 396,534 - +0.8 396,534 - +0.6 396,534 - -0.4 396,569 + -0.7 396,569 + -1.1 396,570 - +0.6 396,571 + -0.3 396,571 + +0.2 396,572 - -1.3 396,572 - -0.1 396,572 - -0.5 396,760 - +0.8 396,760 - -0.9 396,798 + GFF385 0.11 +1.2 396,799 - GFF385 0.11 +0.5 396,799 - GFF385 0.11 -0.4 396,810 + GFF385 0.12 +0.0 396,828 + GFF385 0.14 -0.2 396,915 + GFF385 0.21 +0.7 396,972 + GFF385 0.26 -0.2 396,972 + GFF385 0.26 -0.6 397,014 + GFF385 0.30 +0.9 397,014 + GFF385 0.30 -0.2 397,015 - GFF385 0.30 +1.0 397,015 - GFF385 0.30 -1.1 397,098 + GFF385 0.37 -0.3 397,099 - GFF385 0.37 -1.1 397,134 + GFF385 0.40 +0.8 397,135 - GFF385 0.40 -0.3 397,281 + GFF385 0.53 -0.3 397,282 - GFF385 0.53 -1.1 397,471 - GFF385 0.69 -1.1 397,553 - GFF385 0.76 -0.2 397,553 - GFF385 0.76 +0.3 397,553 - GFF385 0.76 +0.1 397,554 + GFF385 0.76 +0.9 397,554 + GFF385 0.76 -0.4 397,554 + GFF385 0.76 +0.4 397,554 + GFF385 0.76 -0.1 397,584 + GFF385 0.78 -0.1 397,584 + GFF385 0.78 +0.6 397,584 + GFF385 0.78 +0.8 397,585 - GFF385 0.78 -0.7 397,585 - GFF385 0.78 -0.1 397,611 + GFF385 0.81 +0.3 397,844 + +0.7 398,056 + GFF386 0.21 -0.3 398,056 + GFF386 0.21 +0.9 398,056 + GFF386 0.21 -0.7 398,056 + GFF386 0.21 -1.0 398,057 - GFF386 0.21 -0.3 398,152 + GFF386 0.33 +1.9 398,152 + GFF386 0.33 -1.1 398,152 + GFF386 0.33 -0.5 398,534 - GFF386 0.84 -0.4 398,534 - GFF386 0.84 +1.0
Or see this region's nucleotide sequence