Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3764 and GFF3765 are separated by 91 nucleotides GFF3765 and GFF3766 overlap by 41 nucleotides GFF3766 and GFF3767 are separated by 85 nucleotides GFF3767 and GFF3768 are separated by 36 nucleotides
GFF3764 - hypothetical protein, at 109,786 to 112,395
GFF3764
GFF3765 - hypothetical protein, at 112,487 to 113,281
GFF3765
GFF3766 - O-acetyl-ADP-ribose deacetylase, at 113,241 to 113,810
GFF3766
GFF3767 - hypothetical protein, at 113,896 to 114,423
GFF3767
GFF3768 - hypothetical protein, at 114,460 to 115,500
GFF3768
Position (kb) 113
114 Strain fitness (log2 ratio) -2
-1
0
1
2 at 112.431 kb on - strand at 112.667 kb on + strand, within GFF3765 at 112.668 kb on - strand, within GFF3765 at 112.668 kb on - strand, within GFF3765 at 112.710 kb on + strand, within GFF3765 at 112.710 kb on + strand, within GFF3765 at 112.710 kb on + strand, within GFF3765 at 112.711 kb on - strand, within GFF3765 at 112.711 kb on - strand, within GFF3765 at 112.974 kb on + strand, within GFF3765 at 112.974 kb on + strand, within GFF3765 at 112.975 kb on - strand, within GFF3765 at 112.975 kb on - strand, within GFF3765 at 112.975 kb on - strand, within GFF3765 at 113.408 kb on - strand, within GFF3766 at 113.408 kb on - strand, within GFF3766 at 113.845 kb on + strand at 113.845 kb on + strand at 113.857 kb on + strand at 113.884 kb on + strand at 114.777 kb on + strand, within GFF3768
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 112,431 - +2.0 112,667 + GFF3765 0.23 -1.4 112,668 - GFF3765 0.23 +0.9 112,668 - GFF3765 0.23 -1.9 112,710 + GFF3765 0.28 -1.7 112,710 + GFF3765 0.28 +1.2 112,710 + GFF3765 0.28 +0.3 112,711 - GFF3765 0.28 +2.3 112,711 - GFF3765 0.28 +0.6 112,974 + GFF3765 0.61 -0.9 112,974 + GFF3765 0.61 -0.1 112,975 - GFF3765 0.61 -0.0 112,975 - GFF3765 0.61 +1.2 112,975 - GFF3765 0.61 -0.2 113,408 - GFF3766 0.29 -0.5 113,408 - GFF3766 0.29 +2.3 113,845 + +1.8 113,845 + +0.5 113,857 + +0.1 113,884 + -0.5 114,777 + GFF3768 0.30 -0.7
Or see this region's nucleotide sequence